Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03871 ATGGCCTCTGCTTCGCTTCTTCTCACTCTCTACACGCTTTCGCTGCTTCTTTCACCCTCGTTTTCCGACAGCAGGAAAGAACTAAGGGAGAAGGAGGGGTTGTTGTTGTTGAAGAAGGAAAATGCATCATCACATTATATGTTAGGGTTAGGCCACTCAGTGAATCCAAACAGCATTGATCCAACACGTGTTGTCCAGATCTCATGGCAACCAAGAGTCTTTCTATATAGAGAGTTCTTGTCTGCCAAGGAGTGTGACTACCTTATTTCTTTGGCGTATGATGTGAACGAAAAATCCTTTGATGCGGCCAATGGGAGACTTGCATCCGAAACTTCATTGGATATCGAAGATGATATTGTTGCAAAGATTGAAGAAAGAATTTCGCTTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTTTGCAGGTCAAGCATTATGAGCTTGAACAGGATGGCCAGAACTTAGATTATTTTACAAACAAGACCAAATTGGAATCAAATGGACCTCTAATAGCAACCGTTATTTTATATCTCTCAAATTCTACACAAGGGGGTCAAATTCTCTTTCCCGAATCAGAGCCGAAGAGTAGCGGCATGTCGGATTGTGGAGAAAGTAACAAGTTTCTCCAGCCAGTAAAAGGGAATGCAGTTCTGTTCTTCTCCCTCCACCTAAGTGCAACTCATGACAAGAGGAGTATACATTCTAGATGCCCTATCCTTAAGGGGGATATGTGGTCTGCAATTAAATACTTATATGCAAAACCAATTGGTGAGAGTAAGGTCCCAACCGTATCAGATGGTGGTGATTGTATTGATGAGGATGACAATTGCGCTGCTTGGGCGGCCATGGGAGAATGTCAACGAAATCCTGTGTTCATGATTGGTTCCCAAGATTATTATGGTAACACAGTTCGCATCTCAATTTCGCATTTTCAAATGGCTTCAACGCACCACGACAACGCAGGATCTACTCCCGCCCGCAAGGTTCGGGTTGTGGCCAAACTCCGAGGCAGTTTGCGTCAGGAGCCTGATTCCGAGCCTAAGCTCAATTCATGGATCTCGGTGAATAAGCCACAAGGGGAGAATTTTGAGAGCGTTACTTTATCCTTTGGAGAACAATCTTCTAGTCGGTATTGGATGCATTATTGCTATGAGGAACATGAGGAGAATGAGTTGATATATTCAAGAGAGGTTAAACCTCTTGTTTCAGCAGTGTTTGAAGGTCATAATAGCACCGTTATTGCGTGTGGAGCTAGAGGCAGTGGCAAGACCCACCTAATTCAGGGTTCTGCTGAAAAACCGGGTCTGGCAATGCTTGCAATTGCTGAGTTCACCTCCTTGGCTGAGAAAAATGGGAAGTGGATATCCATTTCTTTCTATGAAGTTGATCACCAGGATCATGCTGTTGATTTATTAAATCCAGGACACCCACCAATTTTGGTTTATGAAGATCGTGGTAGAATTCAGTTTAAAGGACTAAGTCAAATTCCTGTGAAATCCGTTGCCGAATTTCAGAACTTCTACTTTGCTGCATGTTCTGCGCAAAAGACTATTACAAGAAAGGGCTTTGAACATGCTCGTAGAAGTCACATGGGATTAATTGTGAATGTCTTTTCTCAAAATGCAAGTGTAGAAAATGGTCTTGTGAGCAAAATGAGTTTCGTTGATTTGGCAGGTTATGAAGATGCTAGAAAGAAAAGCAGTGACACCATTTGCCTTGCTGAGACTAACAAAATTAACAAGTCCATTTATGCCTTAATGAATGTTTCTCATGCTTTGAGCACCAATGAAAGCCGAGTTCCCTATCGAGAAAGCAAACTTACACGCATGTTGCAAGATTCGTTGAGGGGGACTGGCAGAATTTTGATAGTTGCCTGTTTGAACCCATCATTTTGTCAAGATACTATTTACATGGTAAGCTTAGCATCACGATCATGTCAATCAATTCAACGAACATTCTTAGATTCAACAAAGAAAATTTCAAGTTCAGCAAGCCAGATTAAGACTTATCAGAAGAGGCAGATGACCAAGAGTGTTTTGAAATCCGCTAGGAAAATACCTGCCTCTGTATCATATCACTCGGAAAAGAAGGTTGTTGCTGCACCGAAGTCTGCAATCAAAGCAAGGAAATTATTTGATGAAGCAAGCAATTCTGCTGCTAGAGCTAAAAAGGAAATTTCCATGGTACAAAATTCATCTGAGACTCTATTGGTAAACCAGGACAATTCACTAGACATTACTGGAAATCATGTTGAATCCAACACTAAAGTGGTAAAGGATAATTCACTGCCAGATGCTAGTAAGAATGTGAAAGGCAATCTGATGGTGGAAAATGGTGATTCGTCTTTGAATACTAGCAGTGAAGTGGAAATCTACCCTATAGAGGAAAAGGGAATTTCTCTCAATGGAGAGAATCATCAAGATGCCAGTAATTTCTATGAGGCGGTGGAATTAGTTCACGAAGACCTTAACATGAACAAGGAGAACAACAGTTTAATGATAATTGAACAAGGACAACAAGCATTGGCAATGGTTCAAGAAGGTCAAAACATAAACAAAGAGAACAACAGTTCAATGGCATATGAAGGTGGTTCTACACCAATCAGTTCTCAATTGCGTGATCTTTCTAACCGTTTTAAATGGCTCTATTCGTCAACACCATGGCAGATATCAGAAAAGGAATGCATTTCACTTGATAGCACTTCTGTAGATATCATGGAACCCAAAACTCCTGTAGTTGAACAAACTACGAGCCTTAATGATAGACGGGATATAATGAATCCCAAAAGTCCATGGGAAACATTTAGTGTGCATGGTTCTGGCATGAAGAATTCTCTTGTTGAAGAATATCTAAGATTTTTAAACTCAGCTAACAAGGAAGAATTAAAAAAATTGAAGGGAATTGGAGAGAAGAGAGCAACCTACATACTTGAGCTTCGCGAAGAATCTCCCGAGCCTTTCAAAAGTCTTGATGATTTAAGGGATATTGGACTTTCAGCAAAGCAGATCAAGGGAATTATGAAAAAAGAAGTTGGAGAGCTTTTCAACTAG 3051 0.4077 MASASLLLTLYTLSLLLSPSFSDSRKELREKEGLLLLKKENASSHYMLGLGHSVNPNSIDPTRVVQISWQPRVFLYREFLSAKECDYLISLAYDVNEKSFDAANGRLASETSLDIEDDIVAKIEERISLWTFLPKENSKPLQVKHYELEQDGQNLDYFTNKTKLESNGPLIATVILYLSNSTQGGQILFPESEPKSSGMSDCGESNKFLQPVKGNAVLFFSLHLSATHDKRSIHSRCPILKGDMWSAIKYLYAKPIGESKVPTVSDGGDCIDEDDNCAAWAAMGECQRNPVFMIGSQDYYGNTVRISISHFQMASTHHDNAGSTPARKVRVVAKLRGSLRQEPDSEPKLNSWISVNKPQGENFESVTLSFGEQSSSRYWMHYCYEEHEENELIYSREVKPLVSAVFEGHNSTVIACGARGSGKTHLIQGSAEKPGLAMLAIAEFTSLAEKNGKWISISFYEVDHQDHAVDLLNPGHPPILVYEDRGRIQFKGLSQIPVKSVAEFQNFYFAACSAQKTITRKGFEHARRSHMGLIVNVFSQNASVENGLVSKMSFVDLAGYEDARKKSSDTICLAETNKINKSIYALMNVSHALSTNESRVPYRESKLTRMLQDSLRGTGRILIVACLNPSFCQDTIYMVSLASRSCQSIQRTFLDSTKKISSSASQIKTYQKRQMTKSVLKSARKIPASVSYHSEKKVVAAPKSAIKARKLFDEASNSAARAKKEISMVQNSSETLLVNQDNSLDITGNHVESNTKVVKDNSLPDASKNVKGNLMVENGDSSLNTSSEVEIYPIEEKGISLNGENHQDASNFYEAVELVHEDLNMNKENNSLMIIEQGQQALAMVQEGQNINKENNSSMAYEGGSTPISSQLRDLSNRFKWLYSSTPWQISEKECISLDSTSVDIMEPKTPVVEQTTSLNDRRDIMNPKSPWETFSVHGSGMKNSLVEEYLRFLNSANKEELKKLKGIGEKRATYILELREESPEPFKSLDDLRDIGLSAKQIKGIMKKEVGELFN 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03871 1016 PANTHER KINESIN-RELATED 328 894 IPR027640 GO:0003777|GO:0007018
Aip05g03871 1016 PANTHER KINESIN-RELATED 816 1011 IPR027640 GO:0003777|GO:0007018
Aip05g03871 1016 Pfam Kinesin motor domain 349 644 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03871 1016 SUPERFAMILY RuvA domain 2-like 947 1009 IPR010994 -
Aip05g03871 1016 Gene3D Kinesin motor domain 309 649 IPR036961 -
Aip05g03871 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 329 659 IPR027417 -
Aip05g03871 1016 SMART p4hc 71 252 IPR006620 GO:0005506|GO:0016705|GO:0031418
Aip05g03871 1016 ProSiteProfiles Kinesin motor domain profile. 328 648 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03871 1016 Pfam Helix-hairpin-helix motif 954 1002 - -
Aip05g03871 1016 PRINTS Kinesin heavy chain signature 551 569 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03871 1016 PRINTS Kinesin heavy chain signature 600 621 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03871 1016 PRINTS Kinesin heavy chain signature 408 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03871 1016 PANTHER KINESIN-LIKE PROTEIN KIN-10C 328 894 - -
Aip05g03871 1016 PANTHER KINESIN-LIKE PROTEIN KIN-10C 816 1011 - -
Aip05g03871 1016 Gene3D q2cbj1_9rhob like domain 57 251 - -
Aip05g03871 1016 SMART kinesin_4 326 652 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g03871 1016 Gene3D - 942 1014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03871 Aip-Chr5 146917257 146924853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03871 397 630 Calmodulin-binding Proteins AT5G65930 32.780 1.02e-26 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03871 K10403 - gmx:100809612 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03871 05 146917257 146924853 Aip05g03871 05 146917257 146924853 ECH