Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03864 ATGCCTTGTTCTTCAATAATCACTCCTCAACATAACGATGATGATGATGCTTCCTCCGATTTCAAGCTGAACGAGTCAACCTTCTTGGCCTCACTCATGCCTAAGAAGGAGATTGCCGTCGATCGATTCCTCCAAGATCATCCTAACTACGATGGCCGCGGTGTTCTCATCGCCATCTTCGATTCTGGTGTAGACCCGGCCGCTGCTGGATTGCAGGTTACCTCAGATGGGAAACCCAAAATTCTTGATGTCATTGATTGTTCTGGCAGTGGAGATGTTGATACCTCAAAGGTGGTGAAGGCTGATGCTGATGGTTGTATTTGCGGTGCATCAGGGGCATCTTTGATCATCAATACTTCATGGAAAAATCCTTCTGGTGAATGGCATATTGGTTACAAATTTGTTTATGAGCTTTTTACAGAAGAATTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGACGAGAAAAACCAGGAGGAAATTGCTAAGGCTGTAAAACAGCTTCAAGATTTTGATCAGCAACATATCAAGGTGGAGGATGCACAACTTAAAAGGGCTCGGGAAGATCTCCAGAATAGGCTTGATCTTCTGAAAAGGCAATCTGAGAGCTACGATGATAAAGGACCTGTTGTAGATGCTGTTGTATGGCATGATGGAGAGGTCTGGAGGGTTGCTCTTGACACACACAGTCTTGAGGATGATCCAGACTGTGGGAAGCTTTCTAACTTTGTACCCTTAACTAATTATAGGATTGAGAGGAAGTATGGTGTCTTCAGCAAATTGGATGCTTGTACATTTGTTGTTAACGTCTATAACAATGGAAATGTGTTAAGTATTGTAACAGACTGCTCATCCCATGCCACCCATGTAGCTGGTATTGCTTCTGCTTTCCACCCAAAGGAGCCCTTGTTAAATGGAGTTGCACCCGGTGCACAATTAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACTGGCACAGGTTTGATTCGAGCATTGATAGCTGCTGTTGAGCACAAGTGTGATCTTATCAACATGAGTTATGGTGAACCAACATTACTGCCTGATTATGGACGCTTTGTTGACCTTGTGAATGAAGTGGTGAACAAGCATCGTCTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGGTCTGAGCACTGTTGGTGCACCTGGTGGTACATCTTCAAGTATCATAGGTATTGGTGCATATGTTTCTCCTGCAATGGCTGCAGGTGCCCATTGTCTTGTCGAACCTCCATCTGAGGGGCTTGAATACACTTGGTCTAGCCGAGGGCCAACAGCTGATGGAGACCTTGGGGTGTGTGTGAGCGCCCCTGGTGGTGCTGTTGCTCCTGTTCCTACTTGGACTCTTCAACGACGTATGCTCATGAATGGGACATCAATGGCATCTCCGTCAGCTTGTGGAGGAACTGCATTGCTCATAAGTGCAATGAAGGCTGAGGGAATTTCTGTGAGTCCATATACCGTTAGGAGAGCCCTTGAGAACACAGCTGTTCCCATAGGTGATCTACCTGAGGATAAGTTATCCACTGGACAAGGCCTTATGCAAGTTGACAAGGCTTTTGAATATATAAAGAAGTGTCAAAACTTTCCGTGTGTTAGATATCAAATAAATATCCAGCAAAGTGGAAAAACATATCCTTCATCACGGGGCATCTATCTTCGGGAGGCTAGTGTTTGCCGACAATCTACAGAGTGGATAGTTCAACTTGATGCAAAATTTCATGAAGATGCCAGCAACTTTGAGGATTTGGTTCCATTTGAGGAGTGTATTGAATTGCGTTCTACTGAACCAGCAGTTGTGAAGGTCCCTGACTATTTGCTGCTCATTCATAATGGCCGTACCTTCAATGTAGTTGTTGATCCTTCCAATCTAGGTGATGGTCTTCATTATTATGAGGTCTATGGTATTGACTGCAAAGCACCATGGCGTGGTCCTATTTTTAGAATACCAATTACCATAACCAAGCCCCATGCTGTAACTAGTCAGCCTCCAAGAGTTTCATTTTCGAAGATGATATTCCAGCCAGGCCATATTGAAAGAAGATATGTAGAAGTGCCGCACGGTGCTTCTTGGGTTGAAGCAACAATGAAAACTTCTGGTTTCGATACGGCTCGAAAATTTTATGTGGACGCTGTTCAGATATGCCCACTTCAAAGACCTCTGTCATGGGAAAAAGTGGTATCCTTTCCTTCTCCTGCCACCAAGACCTTTGCGTTTAAGGTTGTAAGCGGTCAAACATTGGAACTAGTCATTTCTCAATTTTGGTCAAGTGGGATAGGGAGTGATGAGACTGCCATTGTGGATTTCGAGGTTGTATTTCACGGTATAAAAGTCAACAAAGAAGAAGTCACACTTGATGGTAGTGAAGGACCACTAAGAATTGATGCTGAAACATTATTGGCATCAGAGGAACTTACACCAACAGCAGCTTTAAATAAGATTAGGGTTCCATATCGACCAGTGGATTCTAAGATTAGTGCACTTTCAACAGACCGTGACAAACTCCCCTCTGGAAAGCAGATACTGGCACTGATTTTGACCTACAAGATCAAATTGGAAGATGGAGCTGAAGTAAAACCTCATATACCATTGCTCAATGGCCGGATATATGATAATAAATTTGAGTCACAATTTTATGTCATTTCTGATTTGAACAAGCGTGTATATTCAACTGGTGATGTCTATCCAAGCTCTTCAAAGCTTCCCAAGGGAGAATACAATTTACAGCTATATTTGAGGCATGACAATGTGCAAATTCTGGAAAAGATAAGGAATTTGGAGTTATTCATTGAGCAAAATTTGGGAGACAAGGAAATCATTCAGCTATCCTTTTTCTCTCAACCTGATGGCCCAGTGATTGGAAATGGCTCCTTTAAATCGTCATTCTTATTTCCAGGTATAAAAGAAGGATTTTATCTGGGTCCACCACCGAAAGATAAGCTTCCCAAGAATTCTACACAAGGTTCTGTATTGTTAGGGGCAATTTCGTATGGGAAACTGTCATTTTCTGAGGGGGAGAATAAAAATCCAGAAAAGCACCCTGCATCATATCAACTATCTTACGTAGTGCCCCCAAATAAGATTGAAGAAGACAAGGGAAAAGGTTCTTCCAAATCTTCCAAGAAGACTGTTTCTGAACGTTTGACAGAAGAGGTAAGAGAGGCAAAAATACATGTGCTAGGAAGCCTTAAGCAAGAAACTGATGAAGAGCGCTCACAGTGGGAAGAGCTAGCTGCCTCTCTTAAATCAGAATATCCAAAATACACTCCACTGCTTGCAAAGATTTTGGAAGGTTTAGTTTCTAGGACTGATGTCGAGGACAAAATTGGTCATGACGAAAAGGTGATTGATGCAGCAAATGAGGTGATTGACAGTATAGACAGGGAAGAATTAGCAAAATTTTTTGCACTGAAAAATGATCCAGAAGATGAAGCAGAGGATATCAGGAAAAAGATGGAAACAACCCGTGACCAGTTAGCAGAGGCATTGTATCAGAAGGGGCTTGCGCTGGCAGAAATAGAGTCTTTAAAGGAGGGAGATACAGAAGGTGCAAAGAAAGACGAGGACAAGAGTGGTGACCAATCTACACATGATCCAGACTTGTTTGAAGAGAATTTTAGAGAATTGAAGAAATGGGTTGATGTCAAGACCCCAAAATATGGAATCCTGTTAGTAACACGCGAGAAGCGTGCTCAAAGGCTTGGTACAGCATTGAAGGCACTCTTGGACCTAATTCACGATGATCCAGAGCCTGCTAAGAAGAAATTCTATGAACTGAAGCTGTCTTTGGTTGAAGAGATTGGATGGACACATTGGGCAACATATGAAAGAGAGTGGATGCTTGTGCGTTTCCCTCCAACCTTGCCCCTCTTCTAA 3921 0.4269 MPCSSIITPQHNDDDDASSDFKLNESTFLASLMPKKEIAVDRFLQDHPNYDGRGVLIAIFDSGVDPAAAGLQVTSDGKPKILDVIDCSGSGDVDTSKVVKADADGCICGASGASLIINTSWKNPSGEWHIGYKFVYELFTEELTSRLKKERKKKWDEKNQEEIAKAVKQLQDFDQQHIKVEDAQLKRAREDLQNRLDLLKRQSESYDDKGPVVDAVVWHDGEVWRVALDTHSLEDDPDCGKLSNFVPLTNYRIERKYGVFSKLDACTFVVNVYNNGNVLSIVTDCSSHATHVAGIASAFHPKEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLIRALIAAVEHKCDLINMSYGEPTLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGIGAYVSPAMAAGAHCLVEPPSEGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALLISAMKAEGISVSPYTVRRALENTAVPIGDLPEDKLSTGQGLMQVDKAFEYIKKCQNFPCVRYQINIQQSGKTYPSSRGIYLREASVCRQSTEWIVQLDAKFHEDASNFEDLVPFEECIELRSTEPAVVKVPDYLLLIHNGRTFNVVVDPSNLGDGLHYYEVYGIDCKAPWRGPIFRIPITITKPHAVTSQPPRVSFSKMIFQPGHIERRYVEVPHGASWVEATMKTSGFDTARKFYVDAVQICPLQRPLSWEKVVSFPSPATKTFAFKVVSGQTLELVISQFWSSGIGSDETAIVDFEVVFHGIKVNKEEVTLDGSEGPLRIDAETLLASEELTPTAALNKIRVPYRPVDSKISALSTDRDKLPSGKQILALILTYKIKLEDGAEVKPHIPLLNGRIYDNKFESQFYVISDLNKRVYSTGDVYPSSSKLPKGEYNLQLYLRHDNVQILEKIRNLELFIEQNLGDKEIIQLSFFSQPDGPVIGNGSFKSSFLFPGIKEGFYLGPPPKDKLPKNSTQGSVLLGAISYGKLSFSEGENKNPEKHPASYQLSYVVPPNKIEEDKGKGSSKSSKKTVSERLTEEVREAKIHVLGSLKQETDEERSQWEELAASLKSEYPKYTPLLAKILEGLVSRTDVEDKIGHDEKVIDAANEVIDSIDREELAKFFALKNDPEDEAEDIRKKMETTRDQLAEALYQKGLALAEIESLKEGDTEGAKKDEDKSGDQSTHDPDLFEENFRELKKWVDVKTPKYGILLVTREKRAQRLGTALKALLDLIHDDPEPAKKKFYELKLSLVEEIGWTHWATYEREWMLVRFPPTLPLF 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03864 1306 SUPERFAMILY Subtilisin-like 34 545 IPR036852 GO:0004252|GO:0006508
Aip05g03864 1306 PANTHER PEPTIDASE S8 15 1206 - -
Aip05g03864 1306 PRINTS Subtilisin serine protease family (S8) signature 52 71 IPR015500 -
Aip05g03864 1306 PRINTS Subtilisin serine protease family (S8) signature 284 297 IPR015500 -
Aip05g03864 1306 PRINTS Subtilisin serine protease family (S8) signature 471 487 IPR015500 -
Aip05g03864 1306 Coils Coil 1079 1099 - -
Aip05g03864 1306 Gene3D - 1057 1306 - -
Aip05g03864 1306 Coils Coil 182 209 - -
Aip05g03864 1306 MobiDBLite consensus disorder prediction 1043 1062 - -
Aip05g03864 1306 MobiDBLite consensus disorder prediction 1192 1215 - -
Aip05g03864 1306 ProSiteProfiles Serine proteases, subtilase domain profile. 26 535 - -
Aip05g03864 1306 Gene3D Peptidase S8/S53 domain 212 545 IPR036852 GO:0004252|GO:0006508
Aip05g03864 1306 Gene3D Peptidase S8/S53 domain 35 125 IPR036852 GO:0004252|GO:0006508
Aip05g03864 1306 Gene3D - 547 682 - -
Aip05g03864 1306 ProSitePatterns Serine proteases, subtilase family, serine active site. 472 482 IPR023828 -
Aip05g03864 1306 Pfam Subtilase family 52 515 IPR000209 GO:0006508|GO:0008236
Aip05g03864 1306 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 32 514 IPR034051 GO:0006508|GO:0008240
Aip05g03864 1306 Coils Coil 1157 1180 - -
Aip05g03864 1306 Pfam Tripeptidyl peptidase II 815 1000 IPR022229 -
Aip05g03864 1306 Gene3D - 150 208 - -
Aip05g03864 1306 PANTHER TRIPEPTIDYL PEPTIDASE II 15 1206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03864 Aip-Chr5 146851371 146865832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03864 K01280 - gmx:100798235 2192.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03864 05 146851371 146865832 Aip05g03864 05 146851371 146865832 ECH
Aip05g03864 05 146851371 146865832 Aip09g04021 09 146563124 146575039 PCT