Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03862 ATGGAGATTTTAGTGGTACTATATGGTGCACTTGCCTTGGCAATCTTGAAATTAAGCTTTTCATGGTGGGTTTCACCCTTCAAAACACATCAAAAACTCAAAACATGTGGGTTTGGAGGGCCACCCCCAAGTTTCCCACTTGGAAACATTCAAGAGATTAAAAAGAAGAACACTAATAATACACTCAGTTCTTCTTCTACTTTAAACTCATCAACCACCACCACCACCCATGATATACACGCCACCGTGTTCCCCTACTTTTCTCGGTGGCAAAATTCTCATGGGAAGGTGTTTATCTATTGGCTGGGTACAGAACCATTTTTGTACATTGCGGAGCCTGAGTTCTTGAAGAAAATGTCCTCAGAAGTTGTAGCAAAAAAATGGGGAAAACCGAATGTTTTTAAAAATGATAGAAAACCCATGTTTGGGAATGGCTTAGTTATGGTTGAAGGAAATGAATGGTTTCATCACCGCCATGTTGTGGCCCCTTCATTCTCTCCCATTAACTTGAAGGCAATGGCAAGCATGATGAAGGAGTCCACAGAGCAAATGATGGAGAGATGGATTACCCAAATTAACTCCGGCAACCGCGAAATCGACGTCGAGAAGGAGATCATAGCGACGGCAGGAGAGATAATAGCAACAACAAGCTTTGGCATGAAAGACCAAAAAGCAAGAGAAATATGTGAAAAGCTAAGAGAATTACAAATGATACTTTTCAAGACAACAAGGTATGTTGGTGTCCCATTTGGCAAATGGTTCAACACAAAGAAAACCCTAGAAGCAAGGAAACTAGGGAAGGAGATTGACAAGCTCTTGTTGCATGTCATAACTAACCGAAAGGATTCAAACAACAAAGAAAAGGATAAAAAAGAAGATTTATTAGGGTTGTTGCTTGAAGCCAATAGAAAAGTAGATGGGAAATTAGGGAAGACATTGAGCACAAGACAACTTGTGGATGAGTGCAAGACTTTCTTTTTTGCTGGCCATGAAACAACGGCATTGGCTATTTCTTGGACTTTGTTTTTATTAGCTGTTCATGAAGATTGGCAAATCCAATTAAGAGATGAGATTAGAGAAGTGGTGGGTGATGATAGAGAGATTGACACTAATGCCCTTTCTGGCTTGAAAAAGATGAAGTGGGTAATGAATGAAGCTGTGAGGCTTTATCCACCAGCACCAAATGTTCAAAGGCAAGTAAGAGAGGACATTAAAGTTGATAATAATTTCACAGTGCCAAGTGGAACCAACATATGGATTGATGTTGTGGGAATGCATCATGATCCAACACTATGGGGAGATGATGTGAATGAGTTTAAGCCAGAGAGGTTCATGGATGATGTCAATGGTGGATGCAACCACAAGATGGGTTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAGCTTGTCATTCATGGAGTATAAGATTGTGTTAACCCTACTTCTCTCTAGGTTTAGGTTCAAACTCTCACCAAGTTATCAACATGAACCTTCTATCATGCTCTCCCTTAGACCCACTCATGGAATTCCTCTAATAGTTGAAACCCTAATTTAG 1566 0.4042 MEILVVLYGALALAILKLSFSWWVSPFKTHQKLKTCGFGGPPPSFPLGNIQEIKKKNTNNTLSSSSTLNSSTTTTTHDIHATVFPYFSRWQNSHGKVFIYWLGTEPFLYIAEPEFLKKMSSEVVAKKWGKPNVFKNDRKPMFGNGLVMVEGNEWFHHRHVVAPSFSPINLKAMASMMKESTEQMMERWITQINSGNREIDVEKEIIATAGEIIATTSFGMKDQKAREICEKLRELQMILFKTTRYVGVPFGKWFNTKKTLEARKLGKEIDKLLLHVITNRKDSNNKEKDKKEDLLGLLLEANRKVDGKLGKTLSTRQLVDECKTFFFAGHETTALAISWTLFLLAVHEDWQIQLRDEIREVVGDDREIDTNALSGLKKMKWVMNEAVRLYPPAPNVQRQVREDIKVDNNFTVPSGTNIWIDVVGMHHDPTLWGDDVNEFKPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRSLSFMEYKIVLTLLLSRFRFKLSPSYQHEPSIMLSLRPTHGIPLIVETLI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03862 521 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 515 - -
Aip05g03862 521 SUPERFAMILY Cytochrome P450 80 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 2 515 - -
Aip05g03862 521 Pfam Cytochrome P450 82 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 Gene3D Cytochrome P450 23 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g03862 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03862 Aip-Chr5 146835299 146841568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03862 6 520 Cytochrome P450 AT5G52400 56.505 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03862 - - gmx:100810679 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03862 05 146835299 146841568 Aip05g03862 05 146835299 146841568 ECH
Aip09g04019 09 146531521 146534320 Aip05g03862 05 146835299 146841568 PCT