Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03851 AAGTATAACTACAAAGAAGACAGATGCTAAGAAAAATGCTGCAAAAGAGGTTGAAGATGATCCATATATTGGATATCTTTTTGGAGAAATTCCTGCTCACAATGAATCTGCTCAAGCTGGCCCTAAAGGACTACACAGTGGCACAAAGAAACTACCATGGTTGAAGAATGATAGGAGCTCTCATCCAAAGAGCAAAGAAGCACCAACCTCCTCCGTCCAGTCCAAGCCATACTCATGGCGCCATCGCAAGTTTTTCTACTGTCCACGCAACGTCGTCCAAAACGTCGTTGTCGGCCATTCTGCAGCTCTTCTTCTCCTCCTCTTATTTATTCCCACTTCCGCGCTCTACACTCATCCCTCTAAATTCTCCATCGGCGTCGCTATCAGCCTTGCACCGCCGTCGCACCGAACCTCCATTACACTGAACTTCCATTGCACCGAGGCTCTGTCGCACCCCTTCCCTGTTCTTCTCCGTCGCACCCCTTCCGTCGGCCTTGCTCGCGTCGCTCCCTTACGAACCCTAATGTGCGTGTCTCTCTTCGATCTCACCACTAGTACTTGCTCTTCTCCGTGTGTTGCTGCGTTTCTCTCTTCGATCTTGCCTCAGCTGTGCAGGACTGAGAATCAAGATGCTATAGATGCCGTAATTGTTGGTATGCTTGCTGATCCAAAGGAGGCAAGAGCTAGAATCAGGGAGCAAAGGTGCTCCAGAGCAGATATTGAACCTCTGCAACTACAAAGAGGATGTGAGGAGAAAGGCTATGCAACTATTGTTAAGTTTGCTGAGCGTGGGCTCCGATCTTTGGGGGTTGCTAGACAGGAAGTACCTGAGAAATCAAAAGATGCTCCTGGTGCACTATGGCAATTTCTTGCGCTGCTACCACTATTTGATCCTCCCAGGCATGATAGCGCTGAAACCATCACAAGAACCCTGAACCTTGGTGTTAATGTGATCAGCTTGCTATTGCCAAGGAAACTGGAAGAAGGCTTGGCATGGGAACAAACATGTACCCTTCATCCTCATTGCTTGAAATTACCACAAGAGTTTGGTTCAAACAGCAACAATGCAATATCTGCATATTGTTCTAGAAGTCGTGCATGGCTTTCTATTAAAAGTTACCAGCCTCCTCTTCCATCTGATCAAGTAAAATCTTTAAATGAATATGATGAGGAAGGAGCCTCACGAAGGCTGATTTTAACTATCATAAAATTTCTCTCAGAGATGTTTCACTTTTATTGGATCAAGGATTCAAGACACAGATGCACTGCTTCTTTCACCCATTGTCAAATGACATGTCCATATAACTTGTTATGTTGGTTGTGCAATTGGGAATGTGATAAGGATACTGTTAGAGAGGGCGAACATGTTTTTGGTGTTGCTCACATTTTTGCATCATTCAATGACACCTTTATTCATGTGACTGATTTGTCTAGAAAGGAAACCCTTGTCCGTATTACTGATACATAG 1468 0.4503 SITTKKTDAKKNAAKEVEDDPYIGYLFGEIPAHNESAQAGPKGLHSGTKKLPWLKNDRSSHPKSKEAPTSSVQSKPYSWRHRKFFYCPRNVVQNVVVGHSAALLLLLLFIPTSALYTHPSKFSIGVAISLAPPSHRTSITLNFHCTEALSHPFPVLLRRTPSVGLARVAPLRTLMCVSLFDLTTSTCSSPCVAAFLSSILPQLCRTENQDAIDAVIVGMLADPKEARARIREQRCSRADIEPLQLQRGCEEKGYATIVKFAERGLRSLGVARQEVPEKSKDAPGALWQFLALLPLFDPPRHDSAETITRTLNLGVNVISLLLPRKLEEGLAWEQTCTLHPHCLKLPQEFGSNSNNAISAYCSRSRAWLSIKSYQPPLPSDQVKSLNEYDEEGASRRLILTIIKFLSEMFHFYWIKDSRHRCTASFTHCQMTCPYNLLCWLCNWECDKDTVREGEHVFGVAHIFASFNDTFIHVTDLSRKETLVRITDT 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03851 488 MobiDBLite consensus disorder prediction 35 74 - -
Aip05g03851 488 Gene3D - 297 317 IPR023214 -
Aip05g03851 488 Gene3D - 250 296 IPR023299 GO:0000166
Aip05g03851 488 PANTHER CALCIUM-TRANSPORTING ATPASE 204 232 - -
Aip05g03851 488 PANTHER CALCIUM-TRANSPORTING ATPASE 251 318 - -
Aip05g03851 488 Gene3D Ribosomal protein S11 442 488 IPR036967 GO:0003735|GO:0005840|GO:0006412
Aip05g03851 488 PANTHER PLASMA MEMBRANE ATPASE 251 318 - -
Aip05g03851 488 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 247 302 IPR023299 GO:0000166
Aip05g03851 488 PANTHER PLASMA MEMBRANE ATPASE 204 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03851 Aip-Chr5 146686732 146693668 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03851 205 317 Primary Pumps ATPases AT2G24520 56.738 1.58e-36 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03851 K01535 - adu:107474466 181.8