Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03820 ATGGGGTTGGGAGTTTCTGCTCTTCCATTTACCTTTGTGGCTCACCTTCTAGCAGTGGCTGCTATTGTCATGGTCTTGTTTTGGAACATACACTTCAGGGGTGGCTTAGCTTGGGAAGCTACCAACAAAAATCTCATATTCAATATCCATCCTGTTCTTATGCTAATTGGATTAATAATCATGGGAGGTGAAGCTATCATAAGTTACAAAGCTCTACCCCTGAAGAAGGAAATTAAGAAGTTGATACATCTTATTCTCCATGCAATTGCACTAGTACTTGGAATAGTTGGAATTTGTGCTGCCTTCAAGAATCATAATGAAAGTGGCATCGCCAATATGTACAGCTTGCATTCATGGCTTGGCATTGGAGTTATTTCCCTTTATGGGATTCAGTGGATATTTGGGTTTGTGATGTTTTTCTATCCTGGAGGGAGTGAATCACTAAGGAAATCCCATGGCCCATGGCACGTGTTGTTTGGGCTGATAGTGTATGTGCTTGCACTTGGGACAGCTTCTCTTGGGTTCTTAGAGAAGCTCACATTCCTGGAGAGCTCAGTAGGTGTGACTAAATATGGTTCAGAGGCACCTAAATATGGTTCAAAGGCACTCCTTGTTAACTTCACTGCCATTGTCACAATCTTGTTTGGTACTTTTGTTGTCTTGTCTTCTATTTCTTCTGCTCCCGGTGAAGATGACTATTCACCCATATAA 711 0.4177 MGLGVSALPFTFVAHLLAVAAIVMVLFWNIHFRGGLAWEATNKNLIFNIHPVLMLIGLIIMGGEAIISYKALPLKKEIKKLIHLILHAIALVLGIVGICAAFKNHNESGIANMYSLHSWLGIGVISLYGIQWIFGFVMFFYPGGSESLRKSHGPWHVLFGLIVYVLALGTASLGFLEKLTFLESSVGVTKYGSEAPKYGSKALLVNFTAIVTILFGTFVVLSSISSAPGEDDYSPI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03820 236 CDD Cyt_b561_ACYB-1_like 40 183 - -
Aip05g03820 236 ProSiteProfiles Cytochrome b561 domain profile. 13 224 IPR006593 -
Aip05g03820 236 Gene3D - 3 233 - -
Aip05g03820 236 PANTHER CYTOCHROME B561-RELATED 1 231 IPR043205 GO:0016491
Aip05g03820 236 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 1 231 - -
Aip05g03820 236 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Aip05g03820 236 SMART 561_7 49 175 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03820 Aip-Chr5 146434563 146437162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03820 1 223 Chloroplast and Mitochondria Gene Families AT4G25570 69.058 2.86e-107 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03820 K08360 - jre:108998649 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03820 05 146434563 146437162 Aip05g03820 05 146434563 146437162 ECH