Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03811 ATGGCTCAACCTCACCCCAATCATCTCACTTGGATTCACCTTCACCTCATCCTCCTCTTCCTCCTCCATGGTAGTCATAGTGTAGTTCATGCACAAGGTTCCATGGAGCCAGTTCCCACAGACATCTCCCACCACAGTTGGCAACCTTCTTTTGCAATCACCATAGGTGCCATCATCTGTGCCTTCCTCTTCATGGGGATCATCACAGTCTACCTTCGTAACTGTACTGGTTCACACATCAACAACAGAAACCAAACCAACCAAACCTCCTCAGAATGTTCATGTTCTTGTTCACAAGGGATCACTAAGGAACTCCTCAACACTTTCCCAATCCTCTTCTACCCCACCATCAAGGACCTCAAGATAGGTAAAGCATCATTGGAATGTGCAATTTGCTTAACTGATTTCAAGGACTATGACACACTGAGGCTTCTACCAAAGTGCAACCATGTCTTTCACCCTCAATGCATAGACTCATGGCTATGTTCCCATGTCACGTGCCCGGTTTGTCGCGCGAATCTGAACCAAGACACATGTGAAATTGCCATAACTGTTCCGACCCAATTGAGCACTCCCCAAAGGGGTGAAGAAAGTCTAGGACTTGAAGCCGAAAACAACGGTGGTGAAGAGAACAACGCGGTGGAACAAAACCATGTCGAGAAAAACGAGGTTTTGAACAGCAACGATGGTGGTGGTGGTGAAGGTGATGGTGGTAGTGACGGGGTTGTGTCAAAACCGAAGCTTTTGAAGTCAAATTCAACAGGACACACGGTTGTGGAGCAAGTGAAGAGCGAGGAGAGGTACACACTGAGGTTACCGGAAGATGTGAGGAGGTACATTCTGGTGAACCATGGTGAAACGGTGCAGCGTTCCTCCAGCTACAACAACAACAATGGCAACAACGTGGTGAGAGGGGTGTGTTGGAGTGAGATTGAAGAGAGCAGCGGTGGTGGTAAGAGAAGCAACAATGGTGAGGTGAAGGTGGAGAGGTGGGTGCTTTGTAGCCGTGGTTGA 1014 0.4832 MAQPHPNHLTWIHLHLILLFLLHGSHSVVHAQGSMEPVPTDISHHSWQPSFAITIGAIICAFLFMGIITVYLRNCTGSHINNRNQTNQTSSECSCSCSQGITKELLNTFPILFYPTIKDLKIGKASLECAICLTDFKDYDTLRLLPKCNHVFHPQCIDSWLCSHVTCPVCRANLNQDTCEIAITVPTQLSTPQRGEESLGLEAENNGGEENNAVEQNHVEKNEVLNSNDGGGGEGDGGSDGVVSKPKLLKSNSTGHTVVEQVKSEERYTLRLPEDVRRYILVNHGETVQRSSSYNNNNGNNVVRGVCWSEIEESSGGGKRSNNGEVKVERWVLCSRG 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03811 337 MobiDBLite consensus disorder prediction 209 224 - -
Aip05g03811 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 180 IPR013083 -
Aip05g03811 337 Pfam Ring finger domain 128 171 IPR001841 -
Aip05g03811 337 MobiDBLite consensus disorder prediction 190 258 - -
Aip05g03811 337 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Aip05g03811 337 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 235 303 - -
Aip05g03811 337 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 216 - -
Aip05g03811 337 CDD RING-H2_EL5_like 128 171 - -
Aip05g03811 337 PANTHER RING FINGER DOMAIN-CONTAINING 235 303 - -
Aip05g03811 337 PANTHER RING FINGER DOMAIN-CONTAINING 8 216 - -
Aip05g03811 337 SMART ring_2 129 170 IPR001841 -
Aip05g03811 337 SUPERFAMILY RING/U-box 128 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03811 Aip-Chr5 146366210 146368062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03811 7 281 Rapid Response to Elicitors AT3G05200 33.569 4.28e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03811 K10664 - gmx:100782532 305.064