Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03798 ATGGGGTTTCTCCGGCGACTCTTCGGCGGCGGAGGAAAGAAGAACCACCACCATACTCCGCCGCCGGGAAAGGAAAAACGGAGCTGGAGCTTTGTGAAACAAAGCACCAGAGACAACAAATCCAACAACAATAACGGCTATGACAACTTCACCGACAACTTGGACCCCAACAGGCACGCCATCGCCGTCGCCGCCGCAACCGCCGCCGTAGCTGAGGCAGCTCTCGCAGCCGCACATGCCGCAGCAGAGGTTGTCAGGCTCACCAGCGGCGGCGGGGCCGCCACGCCGGCGCAGGTTCAACTCCGGCTGGCGGAGGAAATCGCCGCCGTGAAAATACAGTCGGCGTTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCACTTAAAGCATTGGTGAAGTTACAAGCACTGGTGAGAGGCCACATTGTGAGGAAGCAGAGTGCGGATATGCTGAGGCGCATGCAAACTTTGGTGCGCCTCCAGGCTCGTGCACGTGCGAGTCGCGTGCACTTGTCTGACAACATGCCTTCTTTCAAGTCTTCACTTTCTCATTACCCTGTTCCTGAAGAGTATGAGTATCCACTTCGTGCCTATAGTACGAAATTTGATGGATCTTCTATCCTCAAGAGATGTTGTTCCAATTCAAATTTTAGGGACATTGAGTTAGAGAGAGCCCGATTCGGTTCCAGTTGGTTAGACAGTTGGATGGAACAAAGTGCGTGGAGCCAAACTGGCAATGCTTCAAAGAAAAACGGGCACATAGATGACGAGAAGAGTGACAAGATTCTTGAAGTTGATACTTGGAAGCCACACATGAATTCCCACAATAACAGTAGCAGCTCATTCAAGGCACCACAACATTATTTCGCTCCAGATTACAGCGACAACTTTCTCATGGCATATGAATCTCCATCGAAACGTTCCTCGAAAGCGCTAAATACAAGTTTCTCATCTAGGGAAGTGTTGCCCTTAGGTTCTCCTAGATTCCACAAAGGAAAAGAAGTGGTGATGGCTTCAAGAACCGCAGAGAATAGTCCCCAAGCATTTTCGGCCTCATCTAGGCTCAGTAATGGTGGAAGGAGAGGCCCTTTCACACCAACAAAGAGCGAGTGTTCTTGGGGTTTCTTCAATGGATATACTAGTCACCCAAGCTACATGGCTAACACTGAATCTTCAAGAGCTAAGGTTAGGTCACAAAGTGCTCCAAGGCAAAGGCTTGAGTTTGAGAGATATGGTTCAACAAGAAGGAGTTTTCAGAATCCTTGGGATGCAAGGCCTAACCCAAGTTCTACCTCAAGCCAATTTAACTGA 1311 0.4989 MGFLRRLFGGGGKKNHHHTPPPGKEKRSWSFVKQSTRDNKSNNNNGYDNFTDNLDPNRHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGGAATPAQVQLRLAEEIAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQARARASRVHLSDNMPSFKSSLSHYPVPEEYEYPLRAYSTKFDGSSILKRCCSNSNFRDIELERARFGSSWLDSWMEQSAWSQTGNASKKNGHIDDEKSDKILEVDTWKPHMNSHNNSSSSFKAPQHYFAPDYSDNFLMAYESPSKRSSKALNTSFSSREVLPLGSPRFHKGKEVVMASRTAENSPQAFSASSRLSNGGRRGPFTPTKSECSWGFFNGYTSHPSYMANTESSRAKVRSQSAPRQRLEFERYGSTRRSFQNPWDARPNPSSTSSQFN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03798 436 Pfam IQ calmodulin-binding motif 108 126 IPR000048 GO:0005515
Aip05g03798 436 Pfam IQ calmodulin-binding motif 129 146 IPR000048 GO:0005515
Aip05g03798 436 MobiDBLite consensus disorder prediction 7 52 - -
Aip05g03798 436 MobiDBLite consensus disorder prediction 413 436 - -
Aip05g03798 436 MobiDBLite consensus disorder prediction 340 363 - -
Aip05g03798 436 Gene3D - 104 157 - -
Aip05g03798 436 MobiDBLite consensus disorder prediction 34 52 - -
Aip05g03798 436 Pfam Protein of unknown function (DUF4005) 345 421 IPR025064 -
Aip05g03798 436 SMART iq_5 127 148 IPR000048 GO:0005515
Aip05g03798 436 SMART iq_5 104 126 IPR000048 GO:0005515
Aip05g03798 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 150 IPR027417 -
Aip05g03798 436 PANTHER CALMODULIN-BINDING PROTEIN 1 428 - -
Aip05g03798 436 MobiDBLite consensus disorder prediction 388 436 - -
Aip05g03798 436 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Aip05g03798 436 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Aip05g03798 436 PANTHER IQ-DOMAIN 5-RELATED 1 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03798 Aip-Chr5 146241821 146246611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03798 1 407 IQD Protein Family AT5G07240 45.863 1.49e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03798 - - adu:107491176 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03798 05 146241821 146246611 Aip05g03798 05 146241821 146246611 ECH
Aip05g03798 05 146241821 146246611 Aip09g03992 09 146364177 146367210 PCT