Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03779 ATGGCACCTTCTCGGGTGGCTGGAGGGTTAACCCAATCATCATCAGGTTCTGGAATTTTCTTTCAAGGAGATGGGCAGTCACAGAGTGTAGTCAACTCTCACATAAGCTCATCATTCGGTAACTCATCTAATGCGGTCCCTGGAGCTGGTCGTTCTCACCTGGGTCCAGTGTCTGGGGATATGAATAATGCAGTTTTGAACAGTGTGGCAAACTCAGCACCAAGTGTTGGAGCTAGCTCTTTAGTCACAGATGCAAATTCAGCATTCTCTGGTGGGCCCCATTTGCAGAGAAGTGCAAGCATTAACACAGACTCATACTTACGTTTACCTGCTTCGCCCATGTCATTTACATCAAATAATGTTAGTATTTCAGGGTCATCAGTTATGGATGGTTCCAGTGTAGTACAGCAGAGCTCTCACCAAGATCAGAATGTCCAACCATTGCAGCAGAATCAGCAGCATGGTGCCTCTAGTGCTATGTCTATGCCTGGATCTCAAAGTGCCCCTTCCCCGCTTCCAATGGGTGCACAAATACCAGGATCTTTCATGCAAAATACGGATAATTTATCCCAGCTGTCCAAAAAACCTAGGCTGGATATTAAGCAGGAGGATTTAATGCAACAGCAGGTTATACAACAGCTTCTTCAAAGACAGGACACCATGCAATATCAGGGGCGTAATCCACAGATACAGGCTTTGATTCAGCAGCAGCAAAGACTGAGGCAACAACATATCCTTCAGTCAATGCCACAGTTACAGCGAGCACACTTGCAGCAGCAGCAGCAACAACAGCAGCAGCAACAACAACAAATGCATTTGAGGCAGCAGCAATTACAGCAACAATCAATGCAATCTGCAGTAAAGCGCCCGTATGACAGCAGTGTTAATGGAGTATGTGCTCGCAGATTGATGCAATACCTCTATCATCAAAGGCAACGCCCAAGTGAAAACACTATTGCCTATTGGAGAAAATTTGTGGCCGAGTATTACTCTCCTCGAGCAAAGGAACGGTGGTGCTTGTCATTGTATAATAATGTTGGGCATCATGCACTCGGTGTTTTCCCTCAGGCATCTATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTGCTCCCTAGACTCAATGACATCAAATTTGGTAGTGGAGTAATTGATGAACTTCTCTTTTTGGAGTTGCCACGCGAACAAAGATTTCCTTCTGGTGTAATGATGTTAGAATATGCAAAAGCAGTTCAAGAGAGCGTATACGAGCAACTTCGTGTTGTTCGTGAGGGTCACCTGCGTATTATATTTACACAAGACCTTAAGATATTATCTTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTAGAAGGTTGGTTGCACCACAGGTAAACCAGTTGGTCCAAGTAGCTCAAAAATGTCAGAGTACAATTGCTGAAAGTGGTTCAGATGGGGTTTCTCAGCAAGATCTGCAAACAAACAGCAATATGGTTTTGGCTGCTGGCCGTCAACTTGCAAAGAGTCTGGAGTTGCAATCTCTAAATGATTTAGGTTTTTCCAAAAGATATGTAAGATGTTTGCAGATATCTGAGGTTGTCAATTCCATGAAAGATCTGATAGATATCTGTCGGGAGCACAAAATTGGAGCAATTGAGAGCTTGAAGAATTATCCTCGTTTTGCAACCGCGGCTAAGCTCCAGATGCAAAAAATGCATGAGATGGAACAGCTAGCAAATGTTCAAGGTCTGCCAACTGATCGAAACACGATTAACAAACTAATGGCAATGAATCCTAGTTTGAACAACCCAATAAATAATAATCCTAATATGATAAATCGTGGTGGTTTGAGTGGATCAGCACAAGCTGCTCTGGCACTTAACTACCAGAGTCTTCTTATGAGGCAAAACTCGATGAATTCAAGCCCTGGCTCAATTCAGAGAGAAGGATCATCATCTTTCAACAATGCAAACCAGAGTCCCTCGTCAGCTATGCAAGGTGCTACCTCTGCCTTTATTCCAGGTTCAATGCAGAATTCACCCATTGGTGGTTTCCCGAGTCCCCATCTACCCCCGCAGCAGCAACAGCAGCAGCCGCAACAACACCTTCAACAGAGATCCTTAAGTGCAAATAGCTTCATGCAACAAAACCATTCACAGGGATCCCAAGGAAATCAAGCTCTACAGCAGCAGATGATCCAGCAACTGCTGATGTCAAATAACAATGGGGGAGTACAATCACAATCTCTTGGTGGACCCAATGCAAATGGGAGCATAGCAAAGAATGGGTTGGGTTTCGGAGGACACTCTCCGTCTCCTTCCATAACTGGAGGATCTGTCAATGTTTCAGGAAATAAAGGTCCGGTTTCAAGGAGCAATAGCTTCAAATCGGCCTCAAACAGTGATTCTTCTCCGGCTGGTGGCAACAATGGATTCAACCCGAGAACTTCGGATATACCGCAGAATCTGCATTTGCAAGATGTGGTTCCAGATATTGCCAGTGATTTTACAGATAGCCCCTTCTTCAGTAGTGATCTGGATGATAACATGGGTTTTGGCTGGAAGGCATGA 2589 0.4461 MAPSRVAGGLTQSSSGSGIFFQGDGQSQSVVNSHISSSFGNSSNAVPGAGRSHLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSAFSGGPHLQRSASINTDSYLRLPASPMSFTSNNVSISGSSVMDGSSVVQQSSHQDQNVQPLQQNQQHGASSAMSMPGSQSAPSPLPMGAQIPGSFMQNTDNLSQLSKKPRLDIKQEDLMQQQVIQQLLQRQDTMQYQGRNPQIQALIQQQQRLRQQHILQSMPQLQRAHLQQQQQQQQQQQQQMHLRQQQLQQQSMQSAVKRPYDSSVNGVCARRLMQYLYHQRQRPSENTIAYWRKFVAEYYSPRAKERWCLSLYNNVGHHALGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNDIKFGSGVIDELLFLELPREQRFPSGVMMLEYAKAVQESVYEQLRVVREGHLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGVSQQDLQTNSNMVLAAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICREHKIGAIESLKNYPRFATAAKLQMQKMHEMEQLANVQGLPTDRNTINKLMAMNPSLNNPINNNPNMINRGGLSGSAQAALALNYQSLLMRQNSMNSSPGSIQREGSSSFNNANQSPSSAMQGATSAFIPGSMQNSPIGGFPSPHLPPQQQQQQPQQHLQQRSLSANSFMQQNHSQGSQGNQALQQQMIQQLLMSNNNGGVQSQSLGGPNANGSIAKNGLGFGGHSPSPSITGGSVNVSGNKGPVSRSNSFKSASNSDSSPAGGNNGFNPRTSDIPQNLHLQDVVPDIASDFTDSPFFSSDLDDNMGFGWKA 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03779 862 MobiDBLite consensus disorder prediction 1 57 - -
Aip05g03779 862 Pfam LIM-domain binding protein 302 562 IPR029005 -
Aip05g03779 862 MobiDBLite consensus disorder prediction 7 48 - -
Aip05g03779 862 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 150 - -
Aip05g03779 862 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 177 861 - -
Aip05g03779 862 MobiDBLite consensus disorder prediction 127 172 - -
Aip05g03779 862 Coils Coil 257 277 - -
Aip05g03779 862 MobiDBLite consensus disorder prediction 747 762 - -
Aip05g03779 862 PANTHER LIM DOMAIN-BINDING PROTEIN 5 150 IPR029005 -
Aip05g03779 862 PANTHER LIM DOMAIN-BINDING PROTEIN 177 861 IPR029005 -
Aip05g03779 862 MobiDBLite consensus disorder prediction 644 714 - -
Aip05g03779 862 MobiDBLite consensus disorder prediction 127 187 - -
Aip05g03779 862 MobiDBLite consensus disorder prediction 747 832 - -
Aip05g03779 862 MobiDBLite consensus disorder prediction 778 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03779 Aip-Chr5 145948946 145954754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03779 297 566 C2H2 Transcription Factor Family AT1G43850 60.370 7.37e-108 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03779 - - gmx:100816886 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03779 05 145948946 145954754 Aip05g03779 05 145948946 145954754 ECH