Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03762 ATGCCCAAGAGCTTTGTGGCTGGTCCATCACTTCATATGCTGAGACCCATCACATGGAATGATAGGCCGGCTCCAAGAAATGATAAGCTGGTACCAGAGCCAAAGTCAGCTCTGATTCCGGCTCCAATTCTGGCACCGGCTCCGAGCCCAGCTTTGGCTCCGGTTGCGGTCCCAGCTCTAGTTCTGGCCCCAACACCGGCTCTAGCCCTAGCTCAAGGTACGGTTTCGGTTTCAGCTCCAGCTCAGGTCTCAACACCAGCTCCAGAACCGGCTCCTGTCCTAGCTCAACGTCCGGCTCCAGCATCGGCTCCGACCCTAGCTCAAGGTCCGGCTCTAGCTCCAGTCTCGACACCGACTCCAGCATGGGCTCCAGCTCCAATTTTGACACCGGCTCCGGCTGCCATAGAAAATTCATTGGAAAAAGAAGGACAAGAAGAGTTACCACCATCACGATCTGCACAATCGTCAAAAAAGTCTAAGGCTAATAAGGGAAAAAAAAGAAAGGGTAGTGAATTCGAAGTAGCCTCATCGGCTCCTAAGAAGCCTAAGAAAAAAATTATTTGGACAAATTACCTTCATAACCTATTCCTCCTAGCCATAAGGCACATTGGAATACATAAGGCGGTGCCAAAGAAAATTCTTGAGGTGATGAATGTGCCTAACTTGACTAGGGAAAATGTTGCCAGTCACTTGCAGAAATACCGCATATTTCTGAGAAAAATTGCAGAGAAAGGGATAATTGCAGGAATATCTGACAGAACCCTAAGGTCAAAGTTCGCTGCTGAGCTTCCAATTAAGATGATCAGAGCGTTACAAGCCTTATATGAGAAACTTAAAAATAATAATAATTTTGGAACCCCCTTACCCATTTCATTGATCCAAGCTCTCCTTGATTACCATCACCCTTACAACCCTAATTTTCCTTACCTCATTCCAACCAATAATAACACTGCCTTGAACCAAGTCATGAGTCTTGGAGTTGCACCCCAATTCCTTGGACCAAAAGCTCCTATTGGTAATGCAAACAACAACACTATGATCCACCATCAGGTTCCAATTTATGCTCCATATGATCCAGTAATGCATCATCAAAACTATGCTCAATCACCAATGGGGATTAACAATCATCAGCAGCAGAGGAGGTATGATCCAAGAGTGTATCATCAAAGCTATGATCTTGGAAAGGGAAACATGGTTTCTTTGGGAAACCCTAATGTTAATAATAACATTCCCATCATGATGAATGCTGCTCCTTCTTGTTACCCTAGTGTTCCCCCTGCAGGGATTCACAATCAAATGAAGTATAATTATGGTGTCCAATTCCATGGAGGGTTCAATGGTGTTGGTGTTGGTGGTGGTGGTGCAACTACTAATGCTGTTCCTATTCCTATTCCCATTTCCAATAACCACTATAATAGTAATGTTAATGAATTTGGATTCATGGATGGAGCTTCTATCAATAATGTAAATGTGGGAGCTTTTGGGAATAATGGAAACTATCCTGCTTCGGTTCAAGGATGTTATGTTCCTCCTGGATTCTATTCTCCTCCTCCTTCTCCGGAATGTTATGCTTCTCCTTCTCCTCCTCCTCCTACTGGATATTATGCTCCTCCGCCGCCTCCTCCTGCAACCGCGCCTAACAATAATCTAACAATTATTGATGAACTTTCGGCAATGTTGCTGCATCATGCAGCAGCACAAAAGAATTCAGGAGGGATCCAAGACCAAGATTTGCCTCCGCTAGTTGAAAGCCCTTGCGACAGCAATGAAGAACACTCTAAAAATGCAAGTGCAATCAATGAGGATCAGAGTATTCTAGATGATGATTACGTTCTTTCCAACCTTCTCTTCATGCTAGAGGACATGCATATTCTTAAAGAGTATGACCAGGCAGCGGAGAAACAAGACGGCAATGAATTTTTTAAGCCTCACTCATCCACTTCTAATGTGGTGCAATCTCCTGAACAGGTTGGAGGGAACCAAGTCCCTGATGACTTTTTTGACTTTTCTGGCTCGGCTAATCTTATTCAACAGATTTCTGGAAATGTGATTGTTCCATTCAATGAAAACAACATGAATCTGTCAACTGAGACTTCAAAAACAAGCAACAACTACAGTCCAATTCAGGCAAGTAGCTACTAG 2142 0.4393 MPKSFVAGPSLHMLRPITWNDRPAPRNDKLVPEPKSALIPAPILAPAPSPALAPVAVPALVLAPTPALALAQGTVSVSAPAQVSTPAPEPAPVLAQRPAPASAPTLAQGPALAPVSTPTPAWAPAPILTPAPAAIENSLEKEGQEELPPSRSAQSSKKSKANKGKKRKGSEFEVASSAPKKPKKKIIWTNYLHNLFLLAIRHIGIHKAVPKKILEVMNVPNLTRENVASHLQKYRIFLRKIAEKGIIAGISDRTLRSKFAAELPIKMIRALQALYEKLKNNNNFGTPLPISLIQALLDYHHPYNPNFPYLIPTNNNTALNQVMSLGVAPQFLGPKAPIGNANNNTMIHHQVPIYAPYDPVMHHQNYAQSPMGINNHQQQRRYDPRVYHQSYDLGKGNMVSLGNPNVNNNIPIMMNAAPSCYPSVPPAGIHNQMKYNYGVQFHGGFNGVGVGGGGATTNAVPIPIPISNNHYNSNVNEFGFMDGASINNVNVGAFGNNGNYPASVQGCYVPPGFYSPPPSPECYASPSPPPPTGYYAPPPPPPATAPNNNLTIIDELSAMLLHHAAAQKNSGGIQDQDLPPLVESPCDSNEEHSKNASAINEDQSILDDDYVLSNLLFMLEDMHILKEYDQAAEKQDGNEFFKPHSSTSNVVQSPEQVGGNQVPDDFFDFSGSANLIQQISGNVIVPFNENNMNLSTETSKTSNNYSPIQASSY 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03762 713 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 180 239 IPR017930 -
Aip05g03762 713 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 183 236 IPR006447 GO:0003677
Aip05g03762 713 MobiDBLite consensus disorder prediction 81 118 - -
Aip05g03762 713 Gene3D - 180 242 - -
Aip05g03762 713 PANTHER RESPONSE REGULATOR 23-RELATED 137 484 - -
Aip05g03762 713 SUPERFAMILY Homeodomain-like 182 240 IPR009057 -
Aip05g03762 713 PANTHER TWO-COMPONENT RESPONSE REGULATOR 137 484 IPR045279 GO:0009736
Aip05g03762 713 MobiDBLite consensus disorder prediction 568 600 - -
Aip05g03762 713 MobiDBLite consensus disorder prediction 139 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03762 Aip-Chr5 145703310 145707718 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03762 152 259 Response Regulator Gene Family AT5G07210 58.182 8.54e-30 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip05g03762 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03762 - K14491 aip:110272169 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03762 05 145703310 145707718 Aip05g03762 05 145703310 145707718 ECH