Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip05g03761 | ATGAAAAGAATCTATCAAAAAGGTCACTGTCGTtattgtggtgaatcgggatacaccaagaaaaactgtggaaacagaactgctgatgaggtggctgctgctgctgctaaggctgctgctgcagaagctactgttgtccaacctccagctgctaatgGTGGTGAAGCCACCCTTGTCCCAGAACCCCCCACCGAAATTCAGCTTGAAGTCAGTCAACCACCATTGTCACAAACCGACTCTCAAGAGGTCTTGCCTCCTCCTGTGAGACCACCAAAACTCCCTCCCAAAAAGAAGTCATCCAAACAAGAAAAGGCAACTCCAGAAAGCAGGTTTCAAGTAAcaactaccccacctgctgccaccccaccagcaaccagtcaacccacaactcttcatccgtctcatcctatgcaagCTCTTGCCGAATCTGCCGCACGGTTCCCTCTCGCCGCGCCTCCTCCTCTCGGCGTCCCTGTCGTGTCGAGCTTCCATATCCATGCTCTTGGTGTCACTACCAATGGCTGCAATTCCACGGATCCTCACTTCAATTCTCTTAACAAACACCATGGAGCTCTTGCCGATCATCACCGTCATGCTGGTGATTTGGGTAACATTCTTGCAGGCCCTGATGAGGTTGCTGAGATTTCTATCACAGATTTACAGGTAATTACTCAACTAAATGTTGTGCATGCTGATCCTGATGACCTTGGAAGGGGAATTGAGCCCTGGACTTTCCTTCAGAGGTTAGGAGAAGCTGTTTTCATTCCAGTAGGTTGTCCTCACCAAGTTAGAAATCTAAAGGTGAAGAAAATTACAATACATACAATGAAAGATGTGGTTGAAAATTTGGAGAAAGCACGGTATGGAAAAAGTGAGGTTCAGGATGGTTGCATATATTTACTGATGAACTGA | 912 | 0.3596 | MKRIYQKGHCRYCGESGYTKKNCGNRTADEVAAAAAKAAAAEATVVQPPAANGGEATLVPEPPTEIQLEVSQPPLSQTDSQEVLPPPVRPPKLPPKKKSSKQEKATPESRFQVTTTPPAATPPATSQPTTLHPSHPMQALAESAARFPLAAPPPLGVPVVSSFHIHALGVTTNGCNSTDPHFNSLNKHHGALADHHRHAGDLGNILAGPDEVAEISITDLQVITQLNVVHADPDDLGRGIEPWTFLQRLGEAVFIPVGCPHQVRNLKVKKITIHTMKDVVENLEKARYGKSEVQDGCIYLLMN | 303 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip05g03761 | 303 | MobiDBLite | consensus disorder prediction | 106 | 134 | - | - | |
Aip05g03761 | 303 | PANTHER | SUPEROXIDE DISMUTASE [CU-ZN] 3 | 160 | 240 | - | - | |
Aip05g03761 | 303 | SUPERFAMILY | Cu,Zn superoxide dismutase-like | 161 | 244 | IPR036423 | GO:0006801|GO:0046872 | |
Aip05g03761 | 303 | PANTHER | SUPEROXIDE DISMUTASE CU-ZN -RELATED | 160 | 240 | IPR024134 | - | |
Aip05g03761 | 303 | Pfam | Copper/zinc superoxide dismutase (SODC) | 161 | 238 | IPR001424 | GO:0006801|GO:0046872 | |
Aip05g03761 | 303 | MobiDBLite | consensus disorder prediction | 71 | 134 | - | - | |
Aip05g03761 | 303 | MobiDBLite | consensus disorder prediction | 37 | 59 | - | - | |
Aip05g03761 | 303 | Pfam | JmjC domain, hydroxylase | 231 | 267 | IPR003347 | - | |
Aip05g03761 | 303 | PRINTS | Cu-Zn-superoxide dismutase family signature | 162 | 184 | IPR001424 | GO:0006801|GO:0046872 | |
Aip05g03761 | 303 | PRINTS | Cu-Zn-superoxide dismutase family signature | 198 | 207 | IPR001424 | GO:0006801|GO:0046872 | |
Aip05g03761 | 303 | Gene3D | Superoxide dismutase, copper/zinc binding domain | 156 | 252 | IPR036423 | GO:0006801|GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip05g03761 | Aip-Chr5 | 145679213 | 145685048 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Jumonji | Aip05g03761 | Sod_Cu | 2.8e-16 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip05g03761 | K04565 | - | aip:110262722 | 181.03 |