Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03761 ATGAAAAGAATCTATCAAAAAGGTCACTGTCGTtattgtggtgaatcgggatacaccaagaaaaactgtggaaacagaactgctgatgaggtggctgctgctgctgctaaggctgctgctgcagaagctactgttgtccaacctccagctgctaatgGTGGTGAAGCCACCCTTGTCCCAGAACCCCCCACCGAAATTCAGCTTGAAGTCAGTCAACCACCATTGTCACAAACCGACTCTCAAGAGGTCTTGCCTCCTCCTGTGAGACCACCAAAACTCCCTCCCAAAAAGAAGTCATCCAAACAAGAAAAGGCAACTCCAGAAAGCAGGTTTCAAGTAAcaactaccccacctgctgccaccccaccagcaaccagtcaacccacaactcttcatccgtctcatcctatgcaagCTCTTGCCGAATCTGCCGCACGGTTCCCTCTCGCCGCGCCTCCTCCTCTCGGCGTCCCTGTCGTGTCGAGCTTCCATATCCATGCTCTTGGTGTCACTACCAATGGCTGCAATTCCACGGATCCTCACTTCAATTCTCTTAACAAACACCATGGAGCTCTTGCCGATCATCACCGTCATGCTGGTGATTTGGGTAACATTCTTGCAGGCCCTGATGAGGTTGCTGAGATTTCTATCACAGATTTACAGGTAATTACTCAACTAAATGTTGTGCATGCTGATCCTGATGACCTTGGAAGGGGAATTGAGCCCTGGACTTTCCTTCAGAGGTTAGGAGAAGCTGTTTTCATTCCAGTAGGTTGTCCTCACCAAGTTAGAAATCTAAAGGTGAAGAAAATTACAATACATACAATGAAAGATGTGGTTGAAAATTTGGAGAAAGCACGGTATGGAAAAAGTGAGGTTCAGGATGGTTGCATATATTTACTGATGAACTGA 912 0.3596 MKRIYQKGHCRYCGESGYTKKNCGNRTADEVAAAAAKAAAAEATVVQPPAANGGEATLVPEPPTEIQLEVSQPPLSQTDSQEVLPPPVRPPKLPPKKKSSKQEKATPESRFQVTTTPPAATPPATSQPTTLHPSHPMQALAESAARFPLAAPPPLGVPVVSSFHIHALGVTTNGCNSTDPHFNSLNKHHGALADHHRHAGDLGNILAGPDEVAEISITDLQVITQLNVVHADPDDLGRGIEPWTFLQRLGEAVFIPVGCPHQVRNLKVKKITIHTMKDVVENLEKARYGKSEVQDGCIYLLMN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03761 303 MobiDBLite consensus disorder prediction 106 134 - -
Aip05g03761 303 PANTHER SUPEROXIDE DISMUTASE [CU-ZN] 3 160 240 - -
Aip05g03761 303 SUPERFAMILY Cu,Zn superoxide dismutase-like 161 244 IPR036423 GO:0006801|GO:0046872
Aip05g03761 303 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 160 240 IPR024134 -
Aip05g03761 303 Pfam Copper/zinc superoxide dismutase (SODC) 161 238 IPR001424 GO:0006801|GO:0046872
Aip05g03761 303 MobiDBLite consensus disorder prediction 71 134 - -
Aip05g03761 303 MobiDBLite consensus disorder prediction 37 59 - -
Aip05g03761 303 Pfam JmjC domain, hydroxylase 231 267 IPR003347 -
Aip05g03761 303 PRINTS Cu-Zn-superoxide dismutase family signature 162 184 IPR001424 GO:0006801|GO:0046872
Aip05g03761 303 PRINTS Cu-Zn-superoxide dismutase family signature 198 207 IPR001424 GO:0006801|GO:0046872
Aip05g03761 303 Gene3D Superoxide dismutase, copper/zinc binding domain 156 252 IPR036423 GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03761 Aip-Chr5 145679213 145685048 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aip05g03761 Sod_Cu 2.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03761 K04565 - aip:110262722 181.03