Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03760 ATGTTTACCTTCACTACTACTCACTCTAACTCCACCACATGGCCGGCTGTTAACTCTGAATTCTCCACTTCCTATGACACTTCCTCGCCCGTTTCTGACGCAAGTACCAGTGGTGGTGGCGCTCATGGTTTCGTGTTATCTGACGAGGAGGTGCTGCTGGCGGCAACCCATCCCAAGAAGCGAGCGGGGAGGAAGAAGTTCAAGGAGACACGTCACCCTGTGTATAGGGGTGTGAGGAGGAGGAACTCTGATAAGTGGGTTTGTGAAGTTAGGGAGCCAAACAAGAAGTCTAGGATTTGGTTGGGGACATTTCCCACGGCTGAGATGGCGGCGCGTGCCCATGACGTGGCAGCAATCGCCTTGAGAGGCCGCCATGCCTGCCTTAACTTTGCTGACTCTGCGTGGCGGCTACAGTTGCCTGCCACGTCAGATGCCAAGGCCATCCAGAAGGCTGCAGCAGAGGCTGCTGAGGCCTTCCGACCTAGGATGGCCTTGGAGACTAATGACAATTCCAAAGAAAGTATCGATGATGAGGTGGCAGTGGCGGCAGCCGTGCCAAAAGAAGAGGAACAAGGAGTGTTTTGTATGGAGGAGGAAGAGGCCGAGACGGTGTTGGGATTGCCGGAATCGTTGAGAAATATGGTGCTCATGTCCCCAACACATTGCATGGGGTATGAGTACGGATATGCTGACGTGGACGTTGGTGATACTGAGGTGTCATTATGGAGTTTTCCAATTTAG 741 0.5317 MFTFTTTHSNSTTWPAVNSEFSTSYDTSSPVSDASTSGGGAHGFVLSDEEVLLAATHPKKRAGRKKFKETRHPVYRGVRRRNSDKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGRHACLNFADSAWRLQLPATSDAKAIQKAAAEAAEAFRPRMALETNDNSKESIDDEVAVAAAVPKEEEQGVFCMEEEEAETVLGLPESLRNMVLMSPTHCMGYEYGYADVDVGDTEVSLWSFPI 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03760 246 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Aip05g03760 246 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Aip05g03760 246 SMART rav1_2 74 137 IPR001471 GO:0003700|GO:0006355
Aip05g03760 246 Gene3D AP2/ERF domain 74 132 IPR036955 GO:0003700|GO:0006355
Aip05g03760 246 SUPERFAMILY DNA-binding domain 74 133 IPR016177 GO:0003677
Aip05g03760 246 Pfam AP2 domain 73 123 IPR001471 GO:0003700|GO:0006355
Aip05g03760 246 ProSiteProfiles AP2/ERF domain profile. 74 131 IPR001471 GO:0003700|GO:0006355
Aip05g03760 246 CDD AP2 75 133 IPR001471 GO:0003700|GO:0006355
Aip05g03760 246 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 22 245 - -
Aip05g03760 246 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 22 245 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03760 Aip-Chr5 145671879 145673194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03760 12 244 AP2-EREBP Transcription Factor Family AT4G25470 52.766 6.52e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip05g03760 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03760 - K09286 adu:107491210 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03760 05 145671879 145673194 Aip09g03981 09 146224928 146226027 ECH
Aip05g03760 05 145671879 145673194 Aip05g03760 05 145671879 145673194 ECH
Aip05g03760 05 145671879 145673194 Aip09g03981 09 146224928 146226027 PCT