Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03757 ATGTCTTTAAAAATTCTTCAGACAACATTTTCTTCTTCTTCTTCGCTTCTTGTTCCAAATTCCATGGCGCTCTCTCTCTGTCACAGTCCTCTTCCTTTTCCATGTTCTCATTCTTCTCTCAAACCGAAGCTCGCTTTATCTCTCTCTCGCTCTTCTTTCTCACCCACTCTCTCCTTCTCTCCTGCTTCCAATGTCAAGTTCACCACTGCCACACCAAGTGCCTACGTCACAGGCCCCGGCTCGGATCCAATCTTCGCTGAACAGGGTCCAAAGATTGACGGGTCGGGGCGGTTTTTTGAAGTCCTTATTGGTGTTAGACCAGAGCCATTGTGGAAGTTGCTCAGTCAAATTGGAGTGCTGTATGCAATGGAGCCACTTTTAACCGTTATTTTTGTTGTAAACATGAACACTGTATGGGAGAAAGTTATGTCAACTCTTAGAGCTCAGATCTTTGGCAGAATATTGATTCAAAAGGTTGAATTTTTCGACAAATACAAGGTTGGAGAACTCACTGGTTTGTTAACATCTGATTTGGGTTCCCTTAAAGATATTGTGAGCGAGAATGTCTCAAGGGATCGCGGTTTCAGGGCATTATCTGAGGTCATTGGGACGATATTCATTCTTTTTTCTTTATCCCCTCAGCTAGCCCCACTTCTTGGTATTCTGATGCTCACGGTTTCTGTCTCAGTCGCTGTCTACAAGAGATCGACATTCCCTGTTTTCAAAGCACATGGGTTGGCCCAAGCATCAATAGCTGATTGTGTATCAGAAACATTCTCTGCTATTCGAACAGTAAGATCTTTTGGTGGTGAAAAGCGGCAGATGTTTACATTTGCTAAACAGGTTCTGTCTTTCCAGTCAAGTGGGATAAAGCTTGGTACTTTCAAATCATTTAATGAATCTATGACCAGGGTTGCTGTTTATATCTCTTTGATTTCATTATATTGTCTTGGAGGGAACAAAGTTAAGGCGGGTGAGCTCTCTGTCGGAGCTATGGCATCTTTTATTGGATATACTTTCACTTTAACATTTGCTGTTCAAGGACTGGTTAATACCTTTGGGGATCTTCGAGGAGCTTTTGCGGCCGTTGACAGGATCAACTCTGTTTTATCTGGGGTTCAGGTTGATGATTCTCTTGCCTATGGCTTAGAAAGAGAACTAAGGCAACAGAAAGCAGTGGATGATGAGAAATATAAATTATTCTTCTCTAATAGTTCAACTGAGAAGAACCAAATGCATTACATGTCGGCACTAAAAACATCTAGCAATTTGTTTAGCTTGGCTTGGTCTGGAGATGTTTGTCTTGAAGATGTCTATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATCTTACGCGGGTTAAATTTAAAACTAAATTGTGGAGCTGTAACTGCACTGGTAGGTTCTAGTGGCGCAGGCAAAAGTACCATAGTGCAGCTATTGGCTAGATTTTATGAGCCAGCAAGAGGTTGCATAACGGTTGCGGGAGAGGATGTAAGAACATTTGACAAGAGTGAATGGGCCCGGGTTGTCTCTATTGTAAATCAAGAGCCTGTTCTCTTCTCGGTGTCGGTTGGAGAAAATATTGCATATGGTCTTCCAGATGAGAATGTTTCTAAGGAGGATGTCATTAAGGCAGCAAAAGCTGCCAATGCTCATGACTTTATCATCTCACTTCCACAGttgtcttcatgtaaagttaatagttaa 1710 0.4158 MSLKILQTTFSSSSSLLVPNSMALSLCHSPLPFPCSHSSLKPKLALSLSRSSFSPTLSFSPASNVKFTTATPSAYVTGPGSDPIFAEQGPKIDGSGRFFEVLIGVRPEPLWKLLSQIGVLYAMEPLLTVIFVVNMNTVWEKVMSTLRAQIFGRILIQKVEFFDKYKVGELTGLLTSDLGSLKDIVSENVSRDRGFRALSEVIGTIFILFSLSPQLAPLLGILMLTVSVSVAVYKRSTFPVFKAHGLAQASIADCVSETFSAIRTVRSFGGEKRQMFTFAKQVLSFQSSGIKLGTFKSFNESMTRVAVYISLISLYCLGGNKVKAGELSVGAMASFIGYTFTLTFAVQGLVNTFGDLRGAFAAVDRINSVLSGVQVDDSLAYGLERELRQQKAVDDEKYKLFFSNSSTEKNQMHYMSALKTSSNLFSLAWSGDVCLEDVYFSYPLRPDVEILRGLNLKLNCGAVTALVGSSGAGKSTIVQLLARFYEPARGCITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDENVSKEDVIKAAKAANAHDFIISLPQLSSCKVNS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03757 569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 425 563 IPR027417 -
Aip05g03757 569 Pfam ABC transporter 451 551 IPR003439 GO:0005524
Aip05g03757 569 Gene3D ABC transporter type 1, transmembrane domain 78 374 IPR036640 GO:0005524|GO:0016021
Aip05g03757 569 SUPERFAMILY ABC transporter transmembrane region 108 371 IPR036640 GO:0005524|GO:0016021
Aip05g03757 569 Gene3D - 429 561 IPR027417 -
Aip05g03757 569 CDD ABC_6TM_TAP_ABCB8_10_like 95 366 - -
Aip05g03757 569 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 101 358 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip05g03757 569 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 83 561 - -
Aip05g03757 569 Pfam ABC transporter transmembrane region 112 345 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip05g03757 569 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 83 561 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03757 Aip-Chr5 145654828 145660687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03757 431 561 Calmodulin-binding Proteins AT2G36910 44.275 3.16e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03757 K05657 - gmx:100791034 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03757 05 145654828 145660687 Aip05g03757 05 145654828 145660687 ECH