Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03750 ATGATGATCATGGAGAAGAGCAGAACATGGCTGCTTGGCTTGTTGCCATTAACACACTCAAGATTCAGCCATTCAACCTTCCTCCTCTTGACACTGAGATGTGCACACTTTGTAGTTGAAGAGCCAATGGTGATTGGTCACGAGTGTGCTGGGATCATTGAAGAAGTTGGCAGTGAGGTCAAGGCCTTGGTGCCAGGTGACCGTGTGGCGATTGAGCCAGGAATCAGTTGCTGGCGTTGCGACCACTGCAAGCAGGGCCGCTATAACTTGTGCCCTGATATGAAGTTCTTTGCCACTCCACCAGTTCATGGTTCCCTTGCTAATCAGATAGTGCACCCTGCAGACCTATGTTTTAAACTACCAGACAATGTAAGCTTAGAGGAGGGGGCAATGTGTGAGCCCTTAAGCGTCGGTGTTCATGCTTGTAGGCGTGCTGAGATTGGCCCAGAAACAAAGGTGTTGATCATGGGAGCTGGACCTATAGGACTTGTTACAATGCTTGCGGCTCGAGCTTTTGGCGCGCCTAGGATTGTCATAGTGGATGTCGATGACCATCGTTTATCTGTTGCAAAATCTCTTGGTGCTGATGATATTGTCAAAGTCTCGACAAACTCCCAGGATGTTCCTGGAGAAGTTGAACAGATACATAAGGCTATGGGAGCTGATGTAGATGTTACCTTTGACTGTGCCGGTTTCAACAAAACCATGACTACAGCATTGAGTGCTACTAAGCCAGGTGGCAAAGTTTGCTTAGTAGGAATGGGTCATTCTGAAATGACAGTCCCACTCACCCCAGCTGCTGCAAGGGAAGTTGATGTGATTGGTATATTCCGGTATAAGAACACATGGCCTCTATGTCTTGAGTTTCTAAGGAGTGGCAAAATCGATGTGAAGCCCCTTATAACACACAGGTATGGATTCTCTCAGAAGGAAGTGGAAGAAGCATTTGAAACAAGTGCTGCTGGTGGTAATGCTATTAAGGTCATGTTCAATCTTTAG 999 0.4695 MMIMEKSRTWLLGLLPLTHSRFSHSTFLLLTLRCAHFVVEEPMVIGHECAGIIEEVGSEVKALVPGDRVAIEPGISCWRCDHCKQGRYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAEIGPETKVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDHRLSVAKSLGADDIVKVSTNSQDVPGEVEQIHKAMGADVDVTFDCAGFNKTMTTALSATKPGGKVCLVGMGHSEMTVPLTPAAAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRYGFSQKEVEEAFETSAAGGNAIKVMFNL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03750 332 SUPERFAMILY GroES-like 35 158 IPR011032 -
Aip05g03750 332 CDD sorbitol_DH 33 331 IPR045306 GO:0016616
Aip05g03750 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 123 296 IPR036291 -
Aip05g03750 332 PANTHER SORBITOL DEHYDROGENASE 30 332 - -
Aip05g03750 332 Pfam Alcohol dehydrogenase GroES-like domain 36 120 IPR013154 -
Aip05g03750 332 Gene3D - 34 318 - -
Aip05g03750 332 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 46 60 IPR002328 GO:0008270|GO:0016491
Aip05g03750 332 SMART PKS_ER_names_mod 20 330 IPR020843 GO:0016491
Aip05g03750 332 Gene3D - 137 277 - -
Aip05g03750 332 PANTHER L-IDONATE 5-DEHYDROGENASE 30 332 - -
Aip05g03750 332 Pfam Zinc-binding dehydrogenase 160 290 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03750 Aip-Chr5 145601819 145604573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03750 42 265 Monolignol Biosynthesis Gene Families AT4G37980 28.755 4.31e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03750 K00008 - gmx:100791559 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03750 05 145601819 145604573 Aip05g03750 05 145601819 145604573 ECH