Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03732 ATGTATGAGGCTGTGAATTACATAAACCAGCTTCAGAATAAGGTGAAGAAGTTGCAAGCTAAGAGGGATGAATTAAAGAAGCATTTTTCTGATCTGAACAATAATAATGCAATTCATGATGATGATGAAGATGAAGATGAAAGTATTTTACATCTTCCACCCTATGTTGTTGTTCATCCTTTGCAAGGAGTAGGTGTTGAGATTATTTGCAGTTACAGCTTCAAGAAATGTTTGTGTCCCTTGTCAAGATTGCTACACATTCTTATTGGTGAAGGGCTTAACATAATCAACACTATTTCAACCAAAAAAAATGGGAGATTCATACACACTATCCAATCAGAGGATCCAAATATTAGTAGTAGTGCTGATTACTCTGAGCTGCAAAGAAAGCTTACAGAAGCAATAATATCATCATCTTCAAGTTTGCCAGAAACTTTGATTAGACCTGATGAAAGTTGCTTATTATATCTTGATTCTTGA 480 0.3458 MYEAVNYINQLQNKVKKLQAKRDELKKHFSDLNNNNAIHDDDEDEDESILHLPPYVVVHPLQGVGVEIICSYSFKKCLCPLSRLLHILIGEGLNIINTISTKKNGRFIHTIQSEDPNISSSADYSELQRKLTEAIISSSSSLPETLIRPDESCLLYLDS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03732 159 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 143 IPR015660 GO:0003700|GO:0006357
Aip05g03732 159 Coils Coil 1 35 - -
Aip05g03732 159 PANTHER TRANSCRIPTION FACTOR 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03732 Aip-Chr5 145331022 145331690 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03732 3 131 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 35.115 1.22e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03732 - - ahf:112751692 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03732 05 145331022 145331690 Aip09g03963 09 146075579 146077141 PCT