Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03726 ATGTGCAAGGTTGGACAACAAGATACCGGTCTGGTGGTTCAGTGCCGACGGTGCGATGTGGATGCTGCCAGCAATGGTGTATGGCAGCAAATAGGGGTCGCCGACGCAGTTCTCGTCGGAGCTGATGCGGGTCGCGAGAATGGCGGGTGCACGAAGGAGGGGTTGGTGACCAGCGACAGTGACGCGGCAAAGGGGGCTGGCAATGATTTAATTGTCAATAACAACCACATGAAAAGAATGAACCATAACAACTGGAAAAGTGGTGCACTTGCGGGTAATACTCAGAACCTTCTCCGTTGCCATGCCCTCCCGCCAACTCCTCCCACCGCCGCCTTCCCCCGTGGACTTCCAGAAACTAACACCCAAGCTCCCTCACCGCCGCCACCACCACCACCGCAGTATCCTTCTTCCGCTTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCACCACCTCCACCGCCGGAGACGACTCCAAGCCCCCCCACCGCCTCTCCTACACCCTCCTTCGCCGTGCCACCAACTCCTTTTCTTCCCCACTGGGCCATGGTGGCTTCGGCACCGTCTTCTCCGGCACCCTCCCTCCTCCGGCGAGAACCCCCGTCGCAGTGAAGCTCATGGACCCCACAACAACCTCGCAGCAAGGCGAGCGCGAGTTTCACAACGAGCTCTTCTTCGCCTCCGTGCTCCGCCAATCCCCCCACGTCGTCGCCGCCGTGGGATTCTCATCGGACCCAAAACGGCGCCGTTTCCTCCTCGTGTACGACCTCATGGTAAACGGAAACCTCCAAGACGCTCTATTGCATAGAAAGTGCCCTGAACTCATGCAGTGGAACAAGCGCTTCTCTGTTGCATTGGACATAGCAAAAGGTGTTCTTTTCCTTCATAGTTGTGACCCCCCTGTGATTCATAGTGATATTAAGCCCAGTAATATTCTCCTCGATGCTGAATTCAATGCCAGAATTGGGGATTTTGGACTTGCCCGTTTGAAATCGGATCCCAATTTGGATGTTTTGGATGGTGGGGGTGATTTTGAGAAGAAAAAGGAGGGGTTTTTGGATTGTGATGGTGGTGGGGTTGTTGTTGCCGTGGATGATTGTGAAACGGAAAGTGTGAACACTGGTTGTTACTTTGAGGAGGGTAGTTTGGGTGTGGATCAATCTCCTGAGTGTTTTGTTAAGGTGCCCAACTTGGAGACCTCGCCAGAGACTAATGGGGCTGGTGTGTCGGCCTCACCGGAGATGGCAGTAACATTGGCGGGGGCGGCGTCTCTATCGCCGGGGTTTGACAAGGCTAGCAGTGCTCAGAGTGAGAAGGGTGTTAAGAAGAATGGGAAAGGGATGAGGAGTAATTCAGTGAGGGATTGGTGGTGGAAGCAGGACAATGAGGAGGTTGCAGCCTCAGGATCAGGATCAAATCCTGTTGGGGAGGGTAAGACGGTGAAGGATTATGTGATGGAGTGGATTGGGAGGGATGTTGATAAGGAAAGGCCAAAGGGCGAATGGGTTGGAGGAGAAGGTGGGCAATCGGGGAAGCAAGAGAAGAAGAAAATGAAGAAGAAGAGTAGGAAGCACCAATTGGAATGGTGGGAATCAATGGAGGAGGAGAAGTTTGATGATGTTTTAAAGAAGGAGAAGAGGAGGCCGGCGAGAGAGTGGTGGAAGGAGGAGTACGGTGAAGAGCTCGAAAAGAAGAAGAAGAAGAAGAAAAAGAGGAAGGGATTGAATAGCGATGATGATGATGGCAATGGGAGTGAGTGGTGGGTGAGCGACGATGTTTTGTATGGGGATAGGAATTTGAAGAAGGCCAAGAGTAAGAGCAGGAATAACCGTGGAGGCACAGATTGGTGGTTGGAGGGCCTAAGTGGCGACTTATGGAGAACTCGCCGGAACAGCTTCGATTCGGCTAGTGGAGAAATTCCAAAGAGTGGTGGTGTGAGTAGTACTCCAAGCATGAGGGGAACCGTTTGTTATGTTGCTCCGGAGTATGGCTACAGCGGAGATGTCTCTGAGAAGTGTGATGTATATAGTTTTGGTGTCTTGTTGCTAGTTATCATTTCAGGAAGGCGACCCCTTCAGGTGAACGGTTCGCCATTGTCCGAGTTTCACCGTGCAAATCTGTTGTCTTGGGCGCGACATTGCGCTAGAAATGGGAAGCTCGTCGAGCTGGTTGATCAGTCTATTCAGTCATTAGATAAGGATCAGGCTCTTCTATGTATCAAGGTGGCTTTGCTTTGTGTTCTTAAGTCCCCTGCTCGCCGCCCTTCGATGAAAGAGGTTGTGGGAATGCTTTCCGGGGAGTTGGAGCCACCCCAATTGCCCATTGAATACTCGCCTTCGACCCCTTCTCGATTCCCATTCAAGACCCGGAAGAAAGGCCGGTGA 2388 0.518 MCKVGQQDTGLVVQCRRCDVDAASNGVWQQIGVADAVLVGADAGRENGGCTKEGLVTSDSDAAKGAGNDLIVNNNHMKRMNHNNWKSGALAGNTQNLLRCHALPPTPPTAAFPRGLPETNTQAPSPPPPPPPQYPSSAYXXXXXXXXXXXSTTSTAGDDSKPPHRLSYTLLRRATNSFSSPLGHGGFGTVFSGTLPPPARTPVAVKLMDPTTTSQQGEREFHNELFFASVLRQSPHVVAAVGFSSDPKRRRFLLVYDLMVNGNLQDALLHRKCPELMQWNKRFSVALDIAKGVLFLHSCDPPVIHSDIKPSNILLDAEFNARIGDFGLARLKSDPNLDVLDGGGDFEKKKEGFLDCDGGGVVVAVDDCETESVNTGCYFEEGSLGVDQSPECFVKVPNLETSPETNGAGVSASPEMAVTLAGAASLSPGFDKASSAQSEKGVKKNGKGMRSNSVRDWWWKQDNEEVAASGSGSNPVGEGKTVKDYVMEWIGRDVDKERPKGEWVGGEGGQSGKQEKKKMKKKSRKHQLEWWESMEEEKFDDVLKKEKRRPAREWWKEEYGEELEKKKKKKKKRKGLNSDDDDGNGSEWWVSDDVLYGDRNLKKAKSKSRNNRGGTDWWLEGLSGDLWRTRRNSFDSASGEIPKSGGVSSTPSMRGTVCYVAPEYGYSGDVSEKCDVYSFGVLLLVIISGRRPLQVNGSPLSEFHRANLLSWARHCARNGKLVELVDQSIQSLDKDQALLCIKVALLCVLKSPARRPSMKEVVGMLSGELEPPQLPIEYSPSTPSRFPFKTRKKGR 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03726 795 SMART serkin_6 176 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03726 795 Pfam Protein tyrosine and serine/threonine kinase 651 764 IPR001245 GO:0004672|GO:0006468
Aip05g03726 795 Pfam Protein tyrosine and serine/threonine kinase 179 333 IPR001245 GO:0004672|GO:0006468
Aip05g03726 795 ProSiteProfiles Protein kinase domain profile. 176 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03726 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Aip05g03726 795 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 154 795 - -
Aip05g03726 795 MobiDBLite consensus disorder prediction 120 136 - -
Aip05g03726 795 PANTHER OS07G0586332 PROTEIN 154 795 IPR044576 -
Aip05g03726 795 ProSitePatterns Protein kinases ATP-binding region signature. 182 206 IPR017441 GO:0005524
Aip05g03726 795 MobiDBLite consensus disorder prediction 497 521 - -
Aip05g03726 795 Gene3D Transferase(Phosphotransferase) domain 1 631 772 - -
Aip05g03726 795 SUPERFAMILY Protein kinase-like (PK-like) 161 785 IPR011009 -
Aip05g03726 795 MobiDBLite consensus disorder prediction 100 172 - -
Aip05g03726 795 MobiDBLite consensus disorder prediction 773 795 - -
Aip05g03726 795 MobiDBLite consensus disorder prediction 429 457 - -
Aip05g03726 795 Gene3D Transferase(Phosphotransferase) domain 1 167 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03726 Aip-Chr5 145283795 145287357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03726 643 765 Receptor kinase-like Gene Family AT3G58690 34.400 2.61e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Aip05g03726 PK_Tyr_Ser-Thr 6.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03726 - - lja:Lj2g3v0473820.1 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03726 05 145283795 145287357 Aip05g03726 05 145283795 145287357 ECH
Aip05g03726 05 145283795 145287357 Aip09g03962 09 146048082 146050128 PCT