Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03720 ATGGCATTGACTCCACCACCTCATGATGCAACAACAAATCCGTTTCTACTAATAAGATCTATCAGCAGCAGCAATAATGCCATGCTATCTAAAGAAGAAGAAGAAGAAGAGAAGGAGAATAATAAAGGGGAGCCACATACCAATAATTTGTGTGCCGTGATTAATCACTATATCCACACTCTCAATCACTTTAACTTGCGAAACTTGGGCTACCCCCTTAATCAGAATTTCAACTACGATGCATTGGCACCATTGCTAAGATTTCACCTGAACAATGCGGGTGATCCATTTTTAGGAAGCACGGTGTGCCTAAATTCAACATCATTTGAAGTTAGTGTGCTTGATTGGTTTGCAAATTTGTGGGAGATACAAAACAACAAGTACTGGGGATACGTCACCACTGGTGGAACTGAAAGCAATCTTCACGCCATTTTATTAGGGAGAGAAAAATTTCCTGATGGAATTCTATATACTTCACAAGATTCGCATTATTCAATATTCAAAATTGCAAGAATGTACCGAATGCAATGTGTCAAAGTTGGAACTTTGGTCTCCGGTGAAATTGATTGCGCTGAACTAAAAGCTTCATTACTTGCTCACAAGGACCATCCAGCCATCATCAATCTTAACATAGGTACAACAATGAAAGGAGCTGTTGACGACATTGATCTTGTAATACAAACATTGGAGAAAAATGGTTTCAGTCGTGATCGATTCTACATTCACTGTGATGGAGCTCTATTTGGAATCATGCTCCCCTTTCTCAAACAAGCACCAAAGATAAGTTTCAAGAAACCAATCGGAAGTGTGTGTGTTTCTGGACATAAATTCTTAGGATGCCCAATTCCATGTGGAGTTGTAATAACTCGTAAAGAATACATGAATACATTATGTAGAGACATAGAATACATTGGTTCAAGGGATGCAACAATCACAGGTAGCCGATCTGGACATGCTCCAATCTTCCTTTGGTATGCTATCACTAAAAGAGGTTCATTGGGGCTTCAAAAAGAAGCTCAAAGTTGCATAAGGAATGCACGTTACTTACATAATCGATTGCGTGAGGCAAGAATTGGTGCAATGTTAAATGAGTATAGCAACATTGTTGTGTTTGAGAAGCCTCTTGATGATGAATTTAGCCGTAGGTGGAGTTTGGCATGCAAAGGGAACATTGCACACGTCGTGGTCATGCAGCACGTTACCATTGAAATGTTGGATTTGTTTGTTGCTGAGTTTCTTCAAAAACGATCCTTTTGGTGGTTCAAGGATTATGGATCTTCTTTTCAGCCTCGCTGCATTGCAGATGAAATTGGTGCTGCAAATTGTTCTTGCTCAATGCACAGTTTGTTATCGTGA 1356 0.396 MALTPPPHDATTNPFLLIRSISSSNNAMLSKEEEEEEKENNKGEPHTNNLCAVINHYIHTLNHFNLRNLGYPLNQNFNYDALAPLLRFHLNNAGDPFLGSTVCLNSTSFEVSVLDWFANLWEIQNNKYWGYVTTGGTESNLHAILLGREKFPDGILYTSQDSHYSIFKIARMYRMQCVKVGTLVSGEIDCAELKASLLAHKDHPAIINLNIGTTMKGAVDDIDLVIQTLEKNGFSRDRFYIHCDGALFGIMLPFLKQAPKISFKKPIGSVCVSGHKFLGCPIPCGVVITRKEYMNTLCRDIEYIGSRDATITGSRSGHAPIFLWYAITKRGSLGLQKEAQSCIRNARYLHNRLREARIGAMLNEYSNIVVFEKPLDDEFSRRWSLACKGNIAHVVVMQHVTIEMLDLFVAEFLQKRSFWWFKDYGSSFQPRCIADEIGAANCSCSMHSLLS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03720 451 Pfam Pyridoxal-dependent decarboxylase conserved domain 106 361 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aip05g03720 451 Gene3D - 87 326 IPR015421 GO:0003824
Aip05g03720 451 PANTHER - 38 447 - -
Aip05g03720 451 MobiDBLite consensus disorder prediction 27 46 - -
Aip05g03720 451 Gene3D Aspartate Aminotransferase, domain 1 327 416 IPR015422 GO:0003824
Aip05g03720 451 SUPERFAMILY PLP-dependent transferases 65 413 IPR015424 -
Aip05g03720 451 MobiDBLite consensus disorder prediction 29 44 - -
Aip05g03720 451 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03720 Aip-Chr5 145212451 145215197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03720 211 356 Calmodulin-binding Proteins AT5G17330 28.947 6.33e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03720 K25193 - gmx:100781665 647.121