Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03717 ATGGTTTCCAAGGCGACGAAGGAGAACGTTTTCCATGGAAACAGCAATGGCAATAGTGTTAGTATTGATGAGTTGTTCAAAGCTCAAGCTCACTTGTATAGAGTAATGGCAAGTTACACCTTACCAATGTGTGTGAAGTGGGCCATCGACCTTTCCATACCAAACATCATCCATAACCGCCATTCCCATTCCATTTCCCTCTCCGATCTCGTGTCGGCTCTTAACGCTCCACCACCAAAAACTCAATATGTCCAGCGCATCATGCGCTTGTTGACACACGACGGTATATTTGCCGTCGTGGTCAACCAAGAAACTAAAGAAGAAGAATATGTTCTTACTCCCACTTCTGAGCTCCTTGTAAAGGGCACTGATCATTGCGTCTCGGCCATGGCCGAGTACATTATTAACCCAACTACGGTTGGGTTTTATAATTATTTGGCTAAATGGACTTGCGACGAGAAGGGACAAACAACTGTTGAAACTGCTTTAGGGTCTTCCGTTGGCTACTGGGATTTCATTCATGAAAATCCTAAGGAGTTGAAGATTTTCAACGATGGTATGGAGAGTGATTCAAACGTTGTGAGGTTTGCTTTGAGGGATTGTAAATCGGTGTTTGAAGGGTTGGATTCGTTGGTTGATGTTGGTGGGGCCACTGGTAACACTGCTAAGATCATTTGTGAGGCGTTTCCGAAGCTGAAATGCACAGTGTTGGATCTTCCACATGTTGTTGCTGGTTTGCCTGAAACTGAAAACTTGAAATTTTTTGGAGGGAGCATGTTTGATTTTATCCCTCATGCTGATGCTATTTTATTCAAGTGGGTTCTGGGCAATTGGAGCGATGATCATTGCATACAAGTCCTAGAAAAATGTAAGGAAGCAATTTCAGGAAAAAGTGGCGGAGGAAAAGTGATTATTATTGACATAGTAATAAATGAAAATGAAGATGAGCATGATGTGATGGAACTAAAACTATTTTCTGATATAGCTGCAATGACTCTTCTTGATGGAAAAGAGAGAGACGAGAAAGATTGGAAAAAACTCTTCTTCAAAGCAGGCTTCAAGAACTACAAAGTGTTTTCCATATTTGGCTTTAGGTCGCTTATTGAGGTTTATCCTTAA 1119 0.4155 MVSKATKENVFHGNSNGNSVSIDELFKAQAHLYRVMASYTLPMCVKWAIDLSIPNIIHNRHSHSISLSDLVSALNAPPPKTQYVQRIMRLLTHDGIFAVVVNQETKEEEYVLTPTSELLVKGTDHCVSAMAEYIINPTTVGFYNYLAKWTCDEKGQTTVETALGSSVGYWDFIHENPKELKIFNDGMESDSNVVRFALRDCKSVFEGLDSLVDVGGATGNTAKIICEAFPKLKCTVLDLPHVVAGLPETENLKFFGGSMFDFIPHADAILFKWVLGNWSDDHCIQVLEKCKEAISGKSGGGKVIIIDIVINENEDEHDVMELKLFSDIAAMTLLDGKERDEKDWKKLFFKAGFKNYKVFSIFGFRSLIEVYP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03717 372 Gene3D - 14 119 IPR036388 -
Aip05g03717 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 371 IPR029063 -
Aip05g03717 372 SUPERFAMILY "Winged helix" DNA-binding domain 23 123 IPR036390 -
Aip05g03717 372 PIRSF O-mtase 11 372 IPR016461 GO:0008168
Aip05g03717 372 Pfam Dimerisation domain 43 92 IPR012967 GO:0046983
Aip05g03717 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 372 IPR016461 GO:0008168
Aip05g03717 372 PANTHER O-METHYLTRANSFERASE 16 371 IPR016461 GO:0008168
Aip05g03717 372 Gene3D Vaccinia Virus protein VP39 120 372 IPR029063 -
Aip05g03717 372 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 16 371 - -
Aip05g03717 372 Pfam O-methyltransferase domain 143 354 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03717 Aip-Chr5 145154375 145158417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03717 34 370 Monolignol Biosynthesis Gene Families AT5G54160 31.014 9.15e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03717 K22588 - gmx:100818724 361.303