Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03697 ATGGGGTGTTCAGTTCCTTCATTACTTCTTCATCTCTTCTCTCTCATAATGTTTTTGGTTTTCAACCCACCATGTGTTTGTGGAAATGTCGAAGACGATGAGCTTAAATCACTGTTGGACTTGAAGGCTGCTTTGGATCCGGACAACACCTATCTCTCATCATGGACCATGAATGGCAACCCTTGTGGTGGTGGTTCCTTTGAAGGTGTTGCTTGCAATGATCAAGGTCAAGTTGCAAATATTTCTCTGCAAGGGAAAGGTCTCTCTGGGAAGCTTTCATCTTCCATTGCTGGACTTAAGCACCTTACAGGACTCTACTTGCATTATAACTCATTATCTGGCGACATACCTAAGGAGATTGCAAACTTGACTCAGCTCAGTGATTTGTATCTGAATGTCAATCATCTTTCTGGGGAAATCCCTTCTGAGATCGGCAAGATGGAGAACCTCCAAGTTTTGCAGCTTTGTTACAATCAGTTGACAGGAAGCATACCTACACAGCTTGGTGATTTGAAAAAGCTTAGTGTTCTTGCTTTGCAATCGAACCAGTTAACGGGTGCAATCCCTGCTAGTCTAGGTGATTTGGGAATGTTGATGAGACTAGATTTGAGCTCTAATCAGCTCTTTGGTTCCATTCCCTCTAGACTAGCTGATGTTACTTCACTGCAAGTTCTGGATGTTCACAACAATACGCTCTCTGGGAATGTACCTCCTGCTCTTAAGAGACTGGAATATGGATTTGTGTATGAATCAAATGCGGGGTTATGTGGAGTTGGGTTTTCATCCTTGAGAGCTTGCAATGATTCGGATCATGTCAACCCCAATAGACCTGAACCCTATGGGGCAGGAGTTAATGGTCTATCTAGAGATATCCCAGAAACTGCAAATGTAAAGTTGCCTTGCAATGGAACTCGGTGCCAAAGTTCATCGAAATCCAAGCACACATCTGTTACGGTTGGCATAGTTCTGGTTATGATTGCAGTATCAGCAATTGGACTTCTGACCTTTACATTGTACCGTCGAAGGAAGCAAAAGCTTGGAAATGCTTTTGATATCTCCGAGAGCCGCCTAAGTACCGATCAAACCAAGGGTATATATAGGAAAAATGGTTCTCCTCTAGTGAGCCTTGAGTATGCCAATGGATGGGACCCTTTAGCCGATAGCAGGAATTTCAATGGAGATAGCCAAGATATGTTCCAGAGTTTCAGGTTCAACTTGGAAGAAGTAGAGTCGGCGACTCAGTATTTCTCAGATATGAATTTGTTAGGTAAGAGCAACTTCAGTGCAACATATAAAGGAGTTTTGAGAGATGGGTCTGTTGTTGCTGTTAAGAGCATCAGTAAAACTAGCTGCAAATCAGATGAAGCTGAATTTTTGAAGGGCCTGAACACTTTGACCTCACTGAGGAATGAGAATTTAGTGAGGTTGAGAGGATTTTGCTGTTCAAGGGGACGAGGTGAATGCTTCCTTGTCTATGATTTTGTGCCTAATGGAAATCTGACGCGTTACCTAGATGTGAAGGAGGGTAACGGAGAAATCCTGGAATGGTCAACTAGAGTTTCTATTGTGAAAGGCATTGCCAAAGGTATAGCATATCTACATGCATACAAGGCAAACAAACCGGCTCTTGTTCACCAAAACATCTCTGCGGAGAAAGTACTCGTCGATCAGCGATACAACCCGCTGCTTTCAGATTCCGGCCTGTACAAGCTTCTCACTAATGATATTGTTTTCTCTGCATTAAAGGCCAGTGCTGCCAAGGGTTATTTGGCTCCTGAGTACACAACTACAGGCAAATTCACAGAGAAAAGCGATGTGTATGCTTTCGGGGTGCTTCTTTTCCAGATCCTCACAGGGAAGCAGAAGATAACTTGCTCGTTACGCCTTGCCGTGGAATCCTTCAAGTTCGAAGAATTCATCGACCCGAATCTGCATGGCAGATTCTTTGAATACGAGGCTGCTAAACTCGCAAAGATGGCTTTGCTTTGCTCCCACGAGTCTCCCTTCGAGAGGCCAACAATGGAAGCCATTGTTCAAGAACTCAGCAACTGTAGTAGCTGTCTCTGA 2067 0.4378 MGCSVPSLLLHLFSLIMFLVFNPPCVCGNVEDDELKSLLDLKAALDPDNTYLSSWTMNGNPCGGGSFEGVACNDQGQVANISLQGKGLSGKLSSSIAGLKHLTGLYLHYNSLSGDIPKEIANLTQLSDLYLNVNHLSGEIPSEIGKMENLQVLQLCYNQLTGSIPTQLGDLKKLSVLALQSNQLTGAIPASLGDLGMLMRLDLSSNQLFGSIPSRLADVTSLQVLDVHNNTLSGNVPPALKRLEYGFVYESNAGLCGVGFSSLRACNDSDHVNPNRPEPYGAGVNGLSRDIPETANVKLPCNGTRCQSSSKSKHTSVTVGIVLVMIAVSAIGLLTFTLYRRRKQKLGNAFDISESRLSTDQTKGIYRKNGSPLVSLEYANGWDPLADSRNFNGDSQDMFQSFRFNLEEVESATQYFSDMNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNTLTSLRNENLVRLRGFCCSRGRGECFLVYDFVPNGNLTRYLDVKEGNGEILEWSTRVSIVKGIAKGIAYLHAYKANKPALVHQNISAEKVLVDQRYNPLLSDSGLYKLLTNDIVFSALKASAAKGYLAPEYTTTGKFTEKSDVYAFGVLLFQILTGKQKITCSLRLAVESFKFEEFIDPNLHGRFFEYEAAKLAKMALLCSHESPFERPTMEAIVQELSNCSSCL 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03697 688 SMART serkin_6 416 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03697 688 CDD STKc_IRAK 422 681 - -
Aip05g03697 688 Pfam Leucine rich repeat 149 208 IPR001611 GO:0005515
Aip05g03697 688 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 7 686 - -
Aip05g03697 688 Gene3D Ribonuclease Inhibitor 150 259 IPR032675 -
Aip05g03697 688 ProSiteProfiles Protein kinase domain profile. 416 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03697 688 SUPERFAMILY Protein kinase-like (PK-like) 392 681 IPR011009 -
Aip05g03697 688 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Aip05g03697 688 Gene3D Transferase(Phosphotransferase) domain 1 495 687 - -
Aip05g03697 688 CDD TM_EGFR-like 312 345 - -
Aip05g03697 688 Gene3D Phosphorylase Kinase; domain 1 386 494 - -
Aip05g03697 688 Gene3D Ribonuclease Inhibitor 33 147 IPR032675 -
Aip05g03697 688 SUPERFAMILY L domain-like 34 242 - -
Aip05g03697 688 Pfam Protein tyrosine and serine/threonine kinase 420 681 IPR001245 GO:0004672|GO:0006468
Aip05g03697 688 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03697 Aip-Chr5 144953754 144957734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03697 7 529 Miscellaneous Gene Families AT4G22730 54.869 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Aip05g03697 PK_Tyr_Ser-Thr 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03697 - - gmx:100789253 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03697 05 144953754 144957734 Aip09g02241 09 103032792 103035502 PCT