LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip05g03696	ATGCATATAGTATCTCCTCATTCCACACCCTTACTACTTCCATTCTTCAAAACTTGTACACAAACACAACCTTCCTTCCTTCACCTGAGTCTGTTAGAAGCTTCCACAAACATGGCTTCAATTGGGGTGTCTGAGATGCTTGGAAACCCCATCAAGTTGAGTGGTGCAGCAAGGTCAGCACCATCAGCTTCTAGCCCTGCCACCTTCAAGACTGTGGCTCTCTTTGGTAAGAAGAAGGCAGCACCACCTCCTCCTTCAAAGAAAGCTGCTGCTGCTGTCACTCCTGCCAATGATGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCCGAGATCCCACCATACTTGACTGGAGAAGTGCCCGGAGACTATGGTTATGATCCTTTTGGTCTCAGCAAGAAGCCAGAGGACTTTGCCAAATATCAGGCATACGAGTTGATTCACGCAAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATTCGGAGCTAACTGCGGTCCTGAGGCTGTTTGGTTCAAGACCGGAGCTCTTCTTCTCGATGGTGGAACGCTGAACTACTTTGGGAAGCCGATCCCCATCAACCTCATTGTTGCTGTCGTCGCTGAGATTGTACTTTTGGGTGGTGCAGAGTACTACAGAATTATCAATGGCCTGGATTTGGAAGACAAGCTTCATCCAGGTGGTCCATTCGACCCGTTGGGACTCGCAAAGGATCCGGACCAAGCTGCATTGTTGAAGGTGAAGGAGATCAAGAATGGAAGGCTTGCCATGTTTGCCATGCTTGGTTTCTACTTCCAAGCTTATGTCACCGGAGAAGGCCCCGTCGAGAACCTTGCAAAGCATCTCAGTGACCCCTTTGGCAACAACTTGCTCACTGTCATTGCTGGTTCTGCTGAGAGAGTTCCAACTCTTTGA	966	0.4938	MHIVSPHSTPLLLPFFKTCTQTQPSFLHLSLLEASTNMASIGVSEMLGNPIKLSGAARSAPSASSPATFKTVALFGKKKAAPPPPSKKAAAAVTPANDELAKWYGPDRRIFLPEGLLDRSEIPPYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEIVLLGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERVPTL	321

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip05g03696	321	Pfam	Chlorophyll A-B binding protein	123	284	IPR022796	-
	Aip05g03696	321	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	32	321	IPR001344	GO:0009765\|GO:0016020
	Aip05g03696	321	PANTHER	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	32	321	-	-
	Aip05g03696	321	SUPERFAMILY	Chlorophyll a-b binding protein	102	312	-	-
	Aip05g03696	321	Gene3D	Chlorophyll a/b binding protein domain	110	321	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip05g03696	Aip-Chr5	144927683	144930195	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip05g03696	38	321	Chloroplast and Mitochondria Gene Families	AT4G10340	80.351	4.65e-152	426

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip05g03696	K08916		-	gmx:100806585	497.278