Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03691 ATGGAGTGCAATAAGGACGAGGCAAACAGAGCTAAAGAAATTGCAGAGAGGAAGTTTAATGCAAAGGATACTTTGGGTGCAAAGAAATTTGCTTTGAAAGCTCAAAATTTGTTTCCAGATCTTGAGGGCATTCCTCAGATGTTAGCAACACTTGATGTGTATATTTCTGCCGAGCGTAAAATAAATGGAGAAGCAGATTGGTATGGTGTACTCGGTGTTGACCCATTTGCCGATGATGATACAGTTAGGAAACAGTACAGGAAGCTAGCTCTTATGCTTCACCCTGACAAAAACAAGTCCGTTGGTGCAGATGGGGCCTTTAAACTTATTTCAGAGGCGTGGAGTTTACTATCAGATAAGTCTAGAAGGGCAGCATATGATGAGAAGAGAAAAACAAAAGCCGGGAAAGTTTCATCGAAGTTTGGAGGTTCATCAGCAGCAACAGGGGCTAATGGCAGTTACAATTTTGCTAAGACTGCCCCTTCAAGTGCAAGGACTCAGAAGAATACTGCGAAAGAACACTCCTCATCTTCTACCCATAAGCCAAAAGGAAATACATTTTGGACTGTTTGCCACAGATGCAAAATGCAGTATGAGTATCTACGAGTCTATCTTAACCTTAAACTCTTGTGTCCCAATTGCCATGAGGCATTTTTGGCTGTAGAAACTGCTCCTCCACCTTCAAGCGGTATTAGACCTGCAGCTTCATGGGACTTTTCACATCAGAAGAATCGTCAAGGACCTAATAAAAGCAAATCTCATGCTGGAAAGAACATGGCAACCCCAAACGTCGGGGCGGGCACAAGCAGCTACCAAAAGGGAAGAGGCCTTAAGAAGGAAGCAGCATGGTTCTAA 855 0.4327 MECNKDEANRAKEIAERKFNAKDTLGAKKFALKAQNLFPDLEGIPQMLATLDVYISAERKINGEADWYGVLGVDPFADDDTVRKQYRKLALMLHPDKNKSVGADGAFKLISEAWSLLSDKSRRAAYDEKRKTKAGKVSSKFGGSSAATGANGSYNFAKTAPSSARTQKNTAKEHSSSSTHKPKGNTFWTVCHRCKMQYEYLRVYLNLKLLCPNCHEAFLAVETAPPPSSGIRPAASWDFSHQKNRQGPNKSKSHAGKNMATPNVGAGTSSYQKGRGLKKEAAWF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03691 284 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Aip05g03691 284 MobiDBLite consensus disorder prediction 152 173 - -
Aip05g03691 284 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Aip05g03691 284 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Aip05g03691 284 MobiDBLite consensus disorder prediction 240 270 - -
Aip05g03691 284 PANTHER BNAA04G14940D PROTEIN 1 260 - -
Aip05g03691 284 MobiDBLite consensus disorder prediction 240 284 - -
Aip05g03691 284 SMART dnaj_3 65 122 IPR001623 -
Aip05g03691 284 CDD DnaJ 66 119 IPR001623 -
Aip05g03691 284 PANTHER BNAC03G44070D PROTEIN 1 260 - -
Aip05g03691 284 Gene3D DnaJ domain 63 187 IPR036869 -
Aip05g03691 284 MobiDBLite consensus disorder prediction 152 182 - -
Aip05g03691 284 PRINTS DnaJ domain signature 102 122 IPR001623 -
Aip05g03691 284 PRINTS DnaJ domain signature 68 86 IPR001623 -
Aip05g03691 284 PRINTS DnaJ domain signature 86 101 IPR001623 -
Aip05g03691 284 Pfam DnaJ domain 66 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03691 Aip-Chr5 144892562 144893416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03691 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.468 1.69e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03691 - - ahf:112751648 541.962