Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03679 ATGGATGTGATGAAGGAGAAATTACCACGTTTGCAACATGAGCATGACTTGGCAAAGGAAAACCAGGAAGAAATCAAAGCTGAATGGTCAGAGCTTGGAGAAAAATTAAAAAAGATTGTTGTAAAacagggacttatggagaagcattGGCTGTGCATGAGAACAAGTTCAAGTTCGAGGCTTAAGAGATGGAAAATGGCTTTGGAGAAAATAGCAGACTTGTCTGGTTATCATTTCAAACACGGGGATGGATATGAACACAAGTTTGTTGCCAAGATTGTTGGACATGTATCAATAGAGATTAAACGTGCTACTTTACCTATTGTAGATCACCCAGTTGGATTGGATTCCCAAGTGGAAAAGGTAATTTCTCTTTTGAATGTTGGGTCTAGTGATGGAGTTTGCGTGCTCGGGATTCATGGAATTGGTGGAATAGATGACATTGACCAACAAGAGCAATTAGATGCTCTAGCTGGAAATCTTGATTGGTTTAGTCCTGGTAGTAGAGTTATCATCACAACTCGGGACACGAGTTTGCTATCAAGAGAAATTGTGCGTCAAGAATCACCAAAAAAGCCTGGGAAGCGTAGTCGATTATGGCTCCTTGAAGATATAGTTCAAGTTTTTGAAATGAATATGGGATCTGACAAAATTGAAATGATACATATGGATTTTCCCAAGTTTGAAAAAGTAATAAGATGGGATGGAGAGGCTTTCAAGAAAATGAGAAATCTCAAAACACTGTTTATTAGACATACTTATTTTTCCCAAGGTCCCAAGTATCTTCCAAATTGTTTAAGAGTGTTGAATTGGGAGGAATATCCTTCACCTTGTTTACCACTTGATTTTCATCCGGAGGGACTTGTCATATTCCAATTATCCGGCAAGAGTATACAGTCAGTTAGGTTTCTTGAAAAGCAAAAGTACATGAGCTTGACGGTCATAAATCTTGATGATTCTAATGTAGAAGAGATACCTGATATATCCGGAGTCCCAAATTTAGTAAACCTATCATTGAATATGTGCTTGAATTTAATTAAAATTGACGAATCAATTGTATTCTTAGACAGACTTAGCGTATTGAGTGCTCAAGGTTGCAGGAGGCTTAAGAGATTTCCATCTATCAAGTTGACCAATCTTGTACATCTCTGTCTTTCAGGATGCTCTAGTCTTGAACATTTTCCAAAAATGTTAGGGAAATTAAAGAATATACTAACAATTTATTCGGATGGTACTCTGATAAAAGAATTGCCATCTGCTATTAAAAGGTTTTGTTTGATTAGCCATTCAAGTATGATAAAACATGGAGCAAGTTCCCCACCAGCACTAAGTCCCCCAATTGTCATGTCTCCAGATGAAGAGAAAGTGACTTCTGAGAGGTCTGAAGTAGATGTTGAAGAAGAACAAGGGAGTCCAATGGCACCTTTGGAGGCAAAACATTCTGCCTGCAAACTACCAGATTTGCTCCATGAATCTTTTACAACTTATCTTACCTGGTTTCGCAATGTGGAAGATTTAGACCTGTCAGAGCATAATTTCACAGTTCTTGATGAAAGCCTCAAAGAACTTTGCTCCTTGAGGTCACTTAGTTTGAATGGCTGCAGAGAACTTCGAGAAATTAAAGGGATTCCACCAAACATAAAGTATTTCTCTGCAAGAAACTGCATATCCTTGACTTACGCCAGAAAATACATGTTACTTAACAAGGAATTGCATGAGGATGGAGCCAAGGATTTTGTTCTTCCAAGTAGTAGCATTCCAAAGTGGGTGGAGCATAGTAGCAACAATGATTCAATTTCTTTCTGGTTTCACAACAAGCTTCCTGAAATCTCTTTATGTGTTCTTGTTGGACCTGCGGTTGATCTTTCGCGTACACACATTTGTCCGGAGTTCATCATCAACAGCAGCAGAGGTCAAGCGGAACATCTTGAATCAGTGGAGACATCCAATCAATTAGTGGATCATATATTTATTACTGATCCAAAATTGATGAAGTCCAAAGTGAATGAAGTGATTTTAAAAAATGAATGGAATCATGTTGTGTGTACAATTAAGTCTTGTGGCCAAAGGGGACCAGCTATCAAGAAACTTGGAATCTATTTTCACAAAGATAGAAGTAGCGTGGCGAATATTCAATTTATTGATCCTCTGTTGCATAAAGAAGAGTTGATCATGGGAAATTTTCAGATAAATATGCAACAACAGAAGTATATGGCATCACATGAAAGGAGGCTTTCATTGGATCTTCCTTTAGGAATGAGTTTTTCATTGAATGATCATGTGAGTAGGGAACCAAATTCCAGTGTGCAAGAAAGTAATAATGATTTATGGATGTATAGCAAAGAGTTATCCCTGCGCCAATGTTAG 2367 0.3747 MDVMKEKLPRLQHEHDLAKENQEEIKAEWSELGEKLKKIVVKQGLMEKHWLCMRTSSSSRLKRWKMALEKIADLSGYHFKHGDGYEHKFVAKIVGHVSIEIKRATLPIVDHPVGLDSQVEKVISLLNVGSSDGVCVLGIHGIGGIDDIDQQEQLDALAGNLDWFSPGSRVIITTRDTSLLSREIVRQESPKKPGKRSRLWLLEDIVQVFEMNMGSDKIEMIHMDFPKFEKVIRWDGEAFKKMRNLKTLFIRHTYFSQGPKYLPNCLRVLNWEEYPSPCLPLDFHPEGLVIFQLSGKSIQSVRFLEKQKYMSLTVINLDDSNVEEIPDISGVPNLVNLSLNMCLNLIKIDESIVFLDRLSVLSAQGCRRLKRFPSIKLTNLVHLCLSGCSSLEHFPKMLGKLKNILTIYSDGTLIKELPSAIKRFCLISHSSMIKHGASSPPALSPPIVMSPDEEKVTSERSEVDVEEEQGSPMAPLEAKHSACKLPDLLHESFTTYLTWFRNVEDLDLSEHNFTVLDESLKELCSLRSLSLNGCRELREIKGIPPNIKYFSARNCISLTYARKYMLLNKELHEDGAKDFVLPSSSIPKWVEHSSNNDSISFWFHNKLPEISLCVLVGPAVDLSRTHICPEFIINSSRGQAEHLESVETSNQLVDHIFITDPKLMKSKVNEVILKNEWNHVVCTIKSCGQRGPAIKKLGIYFHKDRSSVANIQFIDPLLHKEELIMGNFQINMQQQKYMASHERRLSLDLPLGMSFSLNDHVSREPNSSVQESNNDLWMYSKELSLRQC 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03679 788 MobiDBLite consensus disorder prediction 437 461 - -
Aip05g03679 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 182 IPR027417 -
Aip05g03679 788 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 182 684 IPR044974 GO:0006952
Aip05g03679 788 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 53 145 IPR044974 GO:0006952
Aip05g03679 788 Gene3D - 16 108 IPR035897 -
Aip05g03679 788 Gene3D Ribonuclease Inhibitor 454 617 IPR032675 -
Aip05g03679 788 Coils Coil 1 28 - -
Aip05g03679 788 PANTHER ARCHAEAL ATPASE 145 181 - -
Aip05g03679 788 Gene3D Ribonuclease Inhibitor 214 437 IPR032675 -
Aip05g03679 788 SUPERFAMILY L domain-like 230 563 - -
Aip05g03679 788 PANTHER ARCHAEAL ATPASE 182 684 - -
Aip05g03679 788 PANTHER ARCHAEAL ATPASE 53 145 - -
Aip05g03679 788 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 145 181 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03679 Aip-Chr5 144727860 144735050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03679 181 427 WRKY Transcription Factor Family AT4G12020 37.037 6.47e-31 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03679 - - ahf:112747389 1167.91