Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03675 ATGGAGATAGAGGCAAGTAAACCTTCGGGGAATAATAATAATAATAACAATGGAGGAGGGGTGGTTCCGGCGTTGAGTCCTCTGAGTGAGACTCTTTGGAGGGAGAAGACGGACACGGAGTTCATCGGAGACGTATCGGCCAGGCTGACGTGGAAGGATCTGACGGTTATGGCTTACGTGACACAAGATGACAACTTAATTGGGACCCTAACAGTAAGAGAGACGATATCATATTCAGCAAGGCTGCGGTTGCCAGATAAGATGGCAAGGTCGGACAAAAGGGCATTGGTTGAGAGCACGATAGTGGCGATGGGGCTTCAAGATTGTGCTGACACAGTGATAGGGAACTGGCACCTGCGTGGGATCAGTGGTGGGGAGAAGAGAAGGGTTAGCATTGCATTGGAAATATTGATGAGGCCTAGGTTGCTCTTCCTTGATGAACCTACTAGTGGCTTAGACAGTGCTTCGGCTTTCTTTGTGACTCAGACACTGCGTGCATTGGCAAGAGATGGAAGAACAGTAATAGCTTCCATTCATCAACCAAGCAGTGAAGTGTTTGAACTCTTTGATCAATTGTACTTGCTCTCTGGTGGCAAAACTGTTTACTTTGGCCAAGCTTCTGAGGCATATGAGTTCTTTGCACAAGCTGGTTTTCCATGCCCTGCATTGAGGAATCCATCAGATCATTTCCTTAGATGCATCAACTCTGACTTTGACAAAGTCAAATCAACTCTTAAAGGGTCCATGAAACTCAGGTTTGAGGGAAGTGATGATCCCTTGGATAAGATCACTACTGCTGAAGCTATCAGGACTCTTATTGATTACTACCGCACTTCTCAGCATTCTTATGCTGCAATACAGAAAGTGGATGAGATATCCAAAGTTGCTAGAGGCTCATGTGCATCATTTGTGTTTGGTTTTGTCACATTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGGGAAAGACTGAATGGGCACTATGGTGTGACTGCATTTGTGATAAGCAACACATTATCTGCAATGCCATTCCTGATATTAATAACTTTTCTGTCTGGAACAATCTGTTACTTCATGGTTAGGCTTCACCCTGGTTTTTGGCATTACCTCTTCTTTGTGCTGTGCCTTTATGCAAGTGTCACAGTTGTTGAGAGCTTAATGATGGCAATAGCTAGCATTGTCCCCAACTTCCTCATGGGCATCATAATTGGAGCAGGGATTCAGGGAATATTCATGCTGGTGTCTGGCTACTTTAGGCTTCCACATGATATTCCAAAGCCAGTCTGGCGCTATCCAATGTCATACATCAGTTTCCATTTTTGGGCACTACAAGGACAATACCAGAATGATCTAACTGGCTTGATATTCGACAACCAGACGCCGGATCTTCCAAAGATACCGGGCGAATACATCCTAGAGAATGTTTTCCAGATTGATGTGAACAGATCAAAGTGGATAGACCTAAGTGTGATCTTCAGCATGATTATAATCTACCGCATAATTTTCTTCATAATGATCAAGATCAATGAGGATGTGACACCATGGGTTAGAGGGTACATTGCTAGGAGAAGGATGCAGCAGAAGAGTGGAACTCAGAACACAACTATTGCACCTGATGTTCTTGCTCACTCACCATCTCTTAGAGCTTATGTTTCTACTCAAAGAAGAAATGGCACTTCCAAAAGTTGA 1710 0.438 MEIEASKPSGNNNNNNNGGGVVPALSPLSETLWREKTDTEFIGDVSARLTWKDLTVMAYVTQDDNLIGTLTVRETISYSARLRLPDKMARSDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKSTLKGSMKLRFEGSDDPLDKITTAEAIRTLIDYYRTSQHSYAAIQKVDEISKVARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLTGLIFDNQTPDLPKIPGEYILENVFQIDVNRSKWIDLSVIFSMIIIYRIIFFIMIKINEDVTPWVRGYIARRRMQQKSGTQNTTIAPDVLAHSPSLRAYVSTQRRNGTSKS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03675 569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 216 IPR027417 -
Aip05g03675 569 Pfam ABC transporter 56 150 IPR003439 GO:0005524
Aip05g03675 569 PANTHER OS04G0528300 PROTEIN 15 56 - -
Aip05g03675 569 Pfam ABC-2 type transporter 295 453 IPR013525 GO:0016020|GO:0140359
Aip05g03675 569 PANTHER OS04G0528300 PROTEIN 57 294 - -
Aip05g03675 569 PANTHER OS04G0528300 PROTEIN 293 559 - -
Aip05g03675 569 ProSitePatterns ABC transporters family signature. 122 136 IPR017871 GO:0005524
Aip05g03675 569 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 57 294 - -
Aip05g03675 569 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 293 559 - -
Aip05g03675 569 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 15 56 - -
Aip05g03675 569 MobiDBLite consensus disorder prediction 1 22 - -
Aip05g03675 569 Gene3D - 26 217 IPR027417 -
Aip05g03675 569 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 222 IPR003439 GO:0005524
Aip05g03675 569 Pfam ABC-2 type transporter 179 235 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03675 Aip-Chr5 144634722 144639748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03675 57 183 Calmodulin-binding Proteins AT2G36910 33.835 4.06e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03675 K05681 - cpap:110812948 708.753