Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03668 ATGGTGGATAGGGATTCAAGTGAAGCACACATGTCAATAGCCGCTTCTTCCATGTTCCCTGGCTTCAAGTTTTGTCCCACTGACGGTGAATTAATCTCTTATTACCTCAGAAAAAAATTGGACGGTGACGAGGACAGTGTTCAGATCATTTCGGAGCTTGAGCTTTGCACCTTTGAGCCTTGGGATTTGCCTGAAAAATCTTTCATTAAATCAAACGATGAGTGGTTTTTTTTCTCGCGACGGGGGAGAAAGTATCCGAATAGTTCACAAAACAAAAGGGCAACTAAAAGTGGGTATTGGAAGGTCACAGGAAAGGAGCGACAGATAGAGTCCGGTCAGAATGTGATTGGTACCAGACGCACTTTGGTATTCCATGTCGGTCGAGTTCCTAAAGGCGAAAGAACTGAATGGATTATTCATGAGTACTGCATCAATGACAAATTTCAGGATTCTTTGGTGGTTTGTCGGCTCAAGAAGAACACAAAATTTCATACAAATGATGATTCTAACAAAGCTTCACGCGAGAGTGGTTGTGGAGTCTCAGAAGGGGGTTACAGTTCAAAGGAGCACTTTAATAGAGTTGCTAATGAAGTCAATCCCAAAGCTTCTTCCAATGAATCCAGTGATAGAGTTGCCAATGAAGCCAATCCCAAAGCTTCTTCCAATCACTCTAAGGTGGATGAAGTGGATTATTATGCAGAGATCAACTTAGATGATATCATCAACTTAGATGAACCAGCACTCTGA 747 0.4203 MVDRDSSEAHMSIAASSMFPGFKFCPTDGELISYYLRKKLDGDEDSVQIISELELCTFEPWDLPEKSFIKSNDEWFFFSRRGRKYPNSSQNKRATKSGYWKVTGKERQIESGQNVIGTRRTLVFHVGRVPKGERTEWIIHEYCINDKFQDSLVVCRLKKNTKFHTNDDSNKASRESGCGVSEGGYSSKEHFNRVANEVNPKASSNESSDRVANEANPKASSNHSKVDEVDYYAEINLDDIINLDEPAL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03668 248 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 246 - -
Aip05g03668 248 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Aip05g03668 248 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 12 246 - -
Aip05g03668 248 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Aip05g03668 248 MobiDBLite consensus disorder prediction 164 184 - -
Aip05g03668 248 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Aip05g03668 248 MobiDBLite consensus disorder prediction 198 225 - -
Aip05g03668 248 MobiDBLite consensus disorder prediction 198 220 - -
Aip05g03668 248 Gene3D NAC domain 27 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03668 Aip-Chr5 144452532 144453851 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03668 6 248 NAC Transcription Factor Family AT2G27300 52.846 2.28e-87 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip05g03668 NAM 1.7e-31 No_clan