Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03663 ATGTATAAAGAAAATGGTGTAGTTCATGATGATGATGATATGCATGACATAGAGAGTGAAGGTTTTCTACATTCAAAGGAGGGAGTGCAAAGGCATGAATCAGTGTTTTCCGAAAGGAATGTGACATACTCTGAACCACTTCTATTGAAGAGGAGGAACACCACTTCCCAGGCTGCTATAATTGGTGCCAACCTTTGCCCTGTTGAAAGCCTTGACTACGAGATTTTTGAGAATGAGGTTTTTAAGCAAGACTGGAGGTCTAGGAAGAAGGTACAGATATTCCAGTATCTGATACTTAAGTGGGGATTTGCTCTTCTTATTGGATTAGGTACTGGAATTATTGGCCTCTTCAATAGTATTTCAGTTGAGAACATAGCAGGTTTCAAGCTGCTTAGGACTACCAGTCTCATATCTGAACACAGATATCTTGAAGCTTTTGTTGTATATGCCGGTATCAATGTGGTTTTAGCAGCAGCCGCTGGTGCACTTTGTGCTTTTATTTCCCCAGCAGCAGCAGGCTCTGGTATCCCAGAGGTAAAAGCATATCTGAATGGTGTGGATTCACACTCTATACTGGCTCCGAGCACTCTTTTTGTAAAGATTATTGGTTCTATCCTGGGAGTTTCTTCTGGATTTGTGGTAGGCAAAGAAGGACCTATGGTACATACAGGTGCATGCTTGGCTTCTTTGTTGGGGCAGGGTGGATCTCGCAAGTATGGCTTGACTTGGTCTTGGCTTAGATATTTCAAAAATGACCGTGATCGGCGAGACCTGATAACTTGTGGTGCGGCTGCTGGTGTTGCTGCTGCCTTTCGTGCTCCAGTAGGTGGTGTCCTCTTTGCCCTTGAAGAGGCAGCTTCATGGTGGCGGAGTGCTCTTCTGTGGAGAACATTTTTCACAACAGCAGTGGTTGCTATTTTTTTCAGAGTTGCAATTCAGTTTTGCTCGACAGGAAAATGCGGGTTATTTGGGGAAGGTGGTCTGATACTTTATGATGTCAATTCATTCACGGGAACATATAGCGCCAGTGACTTAGTAGCAACCATACTATTGGGAATCATTGGAGGCCTTCTTGGAAGTTTGTATAACTACCTTGTTGATAAGGTTGTTCGTACATATAGCATCATCAATGAAAAAGGTGCAGTGTTCAAAATCATGCTTGTTGTTGCAATTTCTCTTTTGACATCATGTTGTTATTATTTCCTACCATGGATTTCAACCTGTGCACCCTGCCCAACTGATAAAACAGAAATCTGTCCCTCGGTCAATGAGTCTGGAGAATACAAAAGGTTTCAGTGCAAACCAGGCTACTACAATGATCTTGCTTCACTCTTTCTAAACACCAATGATGATGCTATTCGTAATCTCTACAGCTCGAGGTTAACCAAGGAGTTTCATATTTCCAGCTTGGGCATCTACTTTGCCACTATCTACTTTCTTGGGATAGTCACTTATGGCATTGCTATTCCATCCGGGCTTTTCATTCCAGTTATCCTTGCCGGCGCTGCGTATGGCCGGTTTATAGGGACACTATTCAAACCGATCGCCACTCTTGACACGGGACTCTTTGCTCTCCTTGGATCTGCATCCCTCCTAGGTGGCACCATGAGAATGACAGTCTCAATTTGTGTCATATTGCTTGAACTCACAAATGATCTCTTGTTACTCCCACTTGTGATGATAGTATTACTAATCTCAAAAACTGTGGGTGATTCCTTCAACAAGGGTGTCTATGACCAAATACTGAAGATCAAAGGGATTCCTTATTTGGAGGCTCATGCAGAACCTTACATGCAGAATTTGGTTGCACGTGACGTCGTCTCTGGCCTACTAATCACCTTTTCAGGTATAGAAAAGGTGGGAAATATACTGCATGCTCTGGAAAATACAGGGCACAATGGTTTTCCTGTCATCAATGAACCGCCTTTCACGGATACACCGGAGCTCTGTGGACTTGTGCTGAGGTCCCATTTGCTAGTGTTGCTGAAGGCGAAGATTTTTTCGAAGGAAAGGGTGCTTGTGAGCCATGACACCTTCCAAAGAATTTCTGCATTGGATTTCGGAAAGCCGGGACTAGGGAAGGGTGTAAAACTAGAAGATCTAGATATCACGGAGGAAGAGCAGGATATGTATGTGGACTTGCATCCTATCAGTAATGCATCACCATACACAGTGCTTGAGACAATGTCACTTGCCAAAGCTGCTGTTCTTTTCCGCACACTCGGACTCAGGCACATGTGTCTTGTTCCGAAGAGCCAACTGAGACCACCAGTTGTTGGGATTCTAACTCGCCATGATTTTATGCCGGAGCATGTTTTGGGACTTCATTCTAACATGAATCCTCATTAA 2349 0.4372 MYKENGVVHDDDDMHDIESEGFLHSKEGVQRHESVFSERNVTYSEPLLLKRRNTTSQAAIIGANLCPVESLDYEIFENEVFKQDWRSRKKVQIFQYLILKWGFALLIGLGTGIIGLFNSISVENIAGFKLLRTTSLISEHRYLEAFVVYAGINVVLAAAAGALCAFISPAAAGSGIPEVKAYLNGVDSHSILAPSTLFVKIIGSILGVSSGFVVGKEGPMVHTGACLASLLGQGGSRKYGLTWSWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIFFRVAIQFCSTGKCGLFGEGGLILYDVNSFTGTYSASDLVATILLGIIGGLLGSLYNYLVDKVVRTYSIINEKGAVFKIMLVVAISLLTSCCYYFLPWISTCAPCPTDKTEICPSVNESGEYKRFQCKPGYYNDLASLFLNTNDDAIRNLYSSRLTKEFHISSLGIYFATIYFLGIVTYGIAIPSGLFIPVILAGAAYGRFIGTLFKPIATLDTGLFALLGSASLLGGTMRMTVSICVILLELTNDLLLLPLVMIVLLISKTVGDSFNKGVYDQILKIKGIPYLEAHAEPYMQNLVARDVVSGLLITFSGIEKVGNILHALENTGHNGFPVINEPPFTDTPELCGLVLRSHLLVLLKAKIFSKERVLVSHDTFQRISALDFGKPGLGKGVKLEDLDITEEEQDMYVDLHPISNASPYTVLETMSLAKAAVLFRTLGLRHMCLVPKSQLRPPVVGILTRHDFMPEHVLGLHSNMNPH 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03663 782 CDD CBS_pair_voltage-gated_CLC_euk_bac 603 770 - -
Aip05g03663 782 SUPERFAMILY Clc chloride channel 78 593 IPR014743 -
Aip05g03663 782 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 27 781 - -
Aip05g03663 782 PRINTS Plant CLC chloride channel signature 74 82 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aip05g03663 782 PRINTS Plant CLC chloride channel signature 285 293 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aip05g03663 782 PRINTS Plant CLC chloride channel signature 299 309 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aip05g03663 782 PRINTS Plant CLC chloride channel signature 317 324 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aip05g03663 782 PRINTS Plant CLC chloride channel signature 441 457 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aip05g03663 782 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 27 781 - -
Aip05g03663 782 SUPERFAMILY CBS-domain pair 594 768 IPR046342 -
Aip05g03663 782 PRINTS Chloride channel signature 169 186 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aip05g03663 782 PRINTS Chloride channel signature 200 219 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aip05g03663 782 PRINTS Chloride channel signature 264 283 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aip05g03663 782 PRINTS Chloride channel signature 489 509 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aip05g03663 782 PRINTS Chloride channel signature 521 537 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aip05g03663 782 PRINTS Chloride channel signature 539 558 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aip05g03663 782 PRINTS Chloride channel signature 577 591 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aip05g03663 782 Pfam Voltage gated chloride channel 157 570 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aip05g03663 782 Gene3D Clc chloride channel 92 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03663 Aip-Chr5 144421913 144426689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03663 11 781 Ion Channels AT5G49890 69.509 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03663 K05016 - gmx:100809070 1150.58