Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03659 atgggtcataacgccGTATATCAGAATGGAGGTTTGCAAATTGTTTTCCTTTTGAGAGGCTATGAAATCATAGATGACATCAAAGAAGAGCTTGAAAGACAATGCCCTGGAGTTTCATGTGCTGATATTCTCGCTTTAGCTGCTAGAGATGCAGTTTTCTTTGCAGGGGGGCCAGTTTATGACATACCAAAGGGAAGAAAAGATGGAACAAGGTCCAAAATTGAGGATACCATTAATCTGCCATCTCCCAACTTCAATGCTTCTGATCTCATCAAGATGTTTGGCCAACATGGCTTTTCAGCACAAGAGATGGTGGCTCTCTCTGGGGCTCATACAATAGGAGTAGCTAGGTGTTCTTCTTTCAAGAACAGGCTAACAAAAGTGGATCCAAATTTGAACTCAGAATTTGCAAAGACACTGTCCAGAACATGCAGTGCCGGTGACAATGCTGAGCAGCCCTTCGATGAAACAAGGGATGATTTCGACAACTTGTACTTCGACGCTTTGGTCTCCGGCAATGGGGTTCTCACATCTGATCAAACATTGTTCACTAGTCCAAGAACTAGGAATTTTGTCAACTCTTATGCACAGAACCAAGCCTTGTTCTTCTTGGATTTCCAACAAGCCATGGTCAAAATGAGCTTGCTTGATATCAAAGAAGGTTCCAAGGGTCAAGTTAGAGATAACTGCCGCAAAATAAATTGA 705 0.4142 MGHNAVYQNGGLQIVFLLRGYEIIDDIKEELERQCPGVSCADILALAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTINLPSPNFNASDLIKMFGQHGFSAQEMVALSGAHTIGVARCSSFKNRLTKVDPNLNSEFAKTLSRTCSAGDNAEQPFDETRDDFDNLYFDALVSGNGVLTSDQTLFTSPRTRNFVNSYAQNQALFFLDFQQAMVKMSLLDIKEGSKGQVRDNCRKIN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03659 234 Pfam Peroxidase 18 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 Gene3D - 18 234 - -
Aip05g03659 234 PRINTS Plant peroxidase signature 102 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 PRINTS Plant peroxidase signature 208 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 PRINTS Plant peroxidase signature 19 32 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 PRINTS Plant peroxidase signature 56 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 PRINTS Plant peroxidase signature 168 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 PANTHER PEROXIDASE 25-RELATED 18 232 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 Gene3D Peroxidase, domain 2 81 213 - -
Aip05g03659 234 CDD secretory_peroxidase 18 233 IPR033905 GO:0004601|GO:0042744
Aip05g03659 234 PANTHER PEROXIDASE 47 18 232 - -
Aip05g03659 234 ProSiteProfiles Plant heme peroxidase family profile. 18 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 PRINTS Haem peroxidase superfamily signature 56 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 PRINTS Haem peroxidase superfamily signature 103 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 PRINTS Haem peroxidase superfamily signature 38 55 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 PRINTS Haem peroxidase superfamily signature 154 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 SUPERFAMILY Heme-dependent peroxidases 17 234 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip05g03659 234 ProSitePatterns Peroxidases proximal heme-ligand signature. 103 113 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03659 Aip-Chr5 144375423 144376762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03659 18 234 Peroxidase AT4G33420 73.853 1.46e-113 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03659 K00430 - gmx:100809245 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03659 05 144375423 144376762 Aip09g02217 09 101013398 101023260 PCT