Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03645 ATGTCAGCTCCACTACGACTAACCCTTTTCCTCTTCTGCATTATCATCTTCTTCTTTCATTACTGCATGTGCAATGACTCATCATCAACAACAACCTTTCAAACCCTTAAGCCCATCCTCCCAAACAAAAGCCCAGGCCCAGGCCCATCTCATCCATCAACAGCGACCATCCCTGCATTCCCTGAACAATCTGATGTCAAAGGTTGCCCCTTGACACTCTCAGATGAACTCTTTGACAGTATAAAGAATGCTTGTGGAGGCGGTGGTGGTGGTGGTTCTGACATGGAGCTCCACCGCACACGGTGCTGCCCTGTTCTTGCATCATGGTTATACTCTGCATATTCTTCCACTGCATTAACCCATAGCCATACCCACACATCATCATTGTCATATGAGATGCCATTGTTACCAGATGACTCGGAAACATGTGTGAATGACTTAGAGAATGCATTGAAAGTGAGAGGGATTCAGCTGAAAAGACCCAATGAGACATGTGATGTTGTGTTCTGCTTCTGTGGGATAAGACTTCACCCTCTGAGTTGCCCAGATGCATTTTCAGTTAATGAAAATGGTGAACTTGTTGGGAATAAAACTGTGAGAAGGTTAGAGAAGAATTGCATCAGTAGAACCAACAATGTCAATGGCTTCCCTGGTCTTGGTGGCTGCTCCAAGTGCTTGAACACACTCTACAGGGGTTGCAAGGAGATGAGGGCTAGTGGCCTATTACTGAAGTTTCTTGAGGCAATTCTCAAAGCTGGAAACCGGATGAATGCCGGAACTTCTAGGGGAAATGCACAAGGTTTCAACCTAAGTGCTCTTAGGAAGCTTCCTGATGTGAAAAGCATTGATAGGAAGACTAGTTTGCTACACTTCATTGTAGAGCAGGTGGCTCAGTCAGAAGGAAGAAGAGAAGCTATGAATCAAAAGCATAACATTCCCAAAATCAACGGTGATATAAGCAACTCCAATGAAAACAATAATAGCCTTGTGCAACATGAGACAGAGAAAGAGTATCTGATGCTTGGTTTACAAGTGTTATTGGGAGGTATAAAGGATGAGTTATCTGAAGTAAAGAAAGCAGCAATAATTGATCATCAGAATTTCATTAGGATGTTATACATTCTCAATGCTCGTGTTAGCGAAATTCGAGAGATTGTAACCAAATGTTGTGGCGAGAACAATGAGAGAGGTGGATTTGTTAAGGAAATGAAAGGGTTTGTAGAGGAATGTGAGGAGGAGCTTAAAGTTGTGAAAGATGAACACCTTAGGATCATGGAGCTTGTGAAGAAAACCAATGAGTATTATCTAGGAGGTGGAGGAGGATCAAACCCCTTTGAACTGTTTCTTATTGTGAGAGATCTTGTGCATGAAGAACCCCCCCTCGTTCATCATGGACGATCGCACAAGCAGCGGCCATGA 1419 0.4341 MSAPLRLTLFLFCIIIFFFHYCMCNDSSSTTTFQTLKPILPNKSPGPGPSHPSTATIPAFPEQSDVKGCPLTLSDELFDSIKNACGGGGGGGSDMELHRTRCCPVLASWLYSAYSSTALTHSHTHTSSLSYEMPLLPDDSETCVNDLENALKVRGIQLKRPNETCDVVFCFCGIRLHPLSCPDAFSVNENGELVGNKTVRRLEKNCISRTNNVNGFPGLGGCSKCLNTLYRGCKEMRASGLLLKFLEAILKAGNRMNAGTSRGNAQGFNLSALRKLPDVKSIDRKTSLLHFIVEQVAQSEGRREAMNQKHNIPKINGDISNSNENNNSLVQHETEKEYLMLGLQVLLGGIKDELSEVKKAAIIDHQNFIRMLYILNARVSEIREIVTKCCGENNERGGFVKEMKGFVEECEEELKVVKDEHLRIMELVKKTNEYYLGGGGGSNPFELFLIVRDLVHEEPPLVHHGRSHKQRP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03645 472 Pfam SPARK 67 231 IPR043891 -
Aip05g03645 472 PANTHER FORMIN-RELATED 225 455 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip05g03645 472 Gene3D Formin, FH2 domain 219 457 IPR042201 -
Aip05g03645 472 SUPERFAMILY Formin homology 2 domain (FH2 domain) 223 455 - -
Aip05g03645 472 Coils Coil 400 420 - -
Aip05g03645 472 Pfam Formin Homology 2 Domain 224 455 IPR015425 -
Aip05g03645 472 PANTHER FORMIN-LIKE PROTEIN 225 455 - -
Aip05g03645 472 SMART it6_source 47 470 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03645 Aip-Chr5 144246515 144248251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03645 214 455 FH2 protein (formin) Gene Family AT1G70140 50.202 8.97e-67 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03645 - - aip:107640085 537.724