Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03643 ATGAATTCGAACAAGATTTCAGAGATGAATTTACCGAGGGAGCGTTTTTTTTCTGAATCTGATATGTCAGATTATATCCTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACATCTTTGAAATTTAGTGAGAATGTTGCGGAGGAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTAGTGGCGAGATTTACAGACAAATGTTTGTATGCCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCACGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACTATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGTCAGAGACAGATATTATGCAAATGATGAACATGCTAAAGTCAGGGATCAGCACCTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTACGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTAGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCACGATTCAAGAGGTTTGTTACATAATTTGTTCTGGTCTGATGGGATTAGCCAACTAGACTACCGACTCTTCGGGGATGTTATTGCTTTTGATGCTACGTACAAGAAGAACAAGTATAGTTGTCCATTAGTAATATTCAGCGGGGTTAACCACCACAACCAAACAATTGTTTTTGCTGCTACGTTAATTGGGGACGAAACTACTGATACATATATTTGGCTCCTGCGTCAGCTCATGTTTGCGATGAGGGGCAAGACCCCGACCTCAATCATAACTGATGGGGCCATGGCGATTAGGAATGCAGTGAGAGATGTATTTCCCGAAGTCAGACATAGATTATGCGCTTGGCACCTTATTTGA 1104 0.4121 MNSNKISEMNLPRERFFSESDMSDYILEAAYAVDSVQDITSLKFSENVAEEIGKYHFSTLQLAFDFYMKYSKSKGFSARKSKTFKNSSGEIYRQMFVCHRQGFRMEKYYTMEKRKKEPRLETRTGCEARMDVKFVPESGRWHIFYFSDEHNYDLLDTQFSAMLPAHRKMSETDIMQMMNMLKSGISTSQIFGLLASQAGGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACHDSRGLLHNLFWSDGISQLDYRLFGDVIAFDATYKKNKYSCPLVIFSGVNHHNQTIVFAATLIGDETTDTYIWLLRQLMFAMRGKTPTSIITDGAMAIRNAVRDVFPEVRHRLCAWHLI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03643 367 PANTHER OS02G0262500 PROTEIN 52 366 - -
Aip05g03643 367 Pfam MULE transposase domain 275 366 IPR018289 -
Aip05g03643 367 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 52 366 IPR031052 GO:0006355
Aip05g03643 367 Pfam FAR1 DNA-binding domain 65 155 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03643 Aip-Chr5 144235572 144236675 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g03643 MULE 8.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03643 - - ahf:112720852 688.723