Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03623 ATGAGAACAAGTTCAAGTTCGAGGCTTAAGAGATGGAAAATGGCTTTGGAGAAAATAGCAGACTTGTCTGGTTATCATTTCAAACACGGGGATGGATGTGAACACAAGTTTGTTGCCAAGATTGTTGGACATGTATCAATAGAGATTAAACATGCTACTTTACCTATTGTAGATCACCCAGTTGGATTGGATTCCCAAGTGGAAAAGGTAATTTCTCTTTTGAATGTTGGGTCTAGTGATGGAGTTTGCGTGCTCGGGATTCATGGAATTGGTGGAATAGATGACATTGACCAACAAGAGCAATTAGATGCTCTAGCTGGAAATCTTGATTGGATTAGTCCTGGTAGTAGAGTTATCATCACAACTCGGGACACGAGTTTGCTATCAAGagaaattgtgcgtcaagaatcaccaaaaaagcctgggaagcgtagtcgattatggCTCCTCGAAGATATAGTTCAAGTTTTTGAAATGAATATGGGATCTGACAAAATTGAAATGATACATATGGATTTTCCCAAGTTTGAAAAAGTAATAAGATGGGATGGAGAGGCTTTCAAGAAAATGAGAAATCTCAAAACACTGTTTATTAGACATACTTATTTTTCCCAAGGTCCCAAGTATCTTCCAAATTGGTTAAGAGTGTTGAATTGGGAGGAATATCCTTCACCTTGTTTACCACTTGATTTTCATCCGGAGGGACTTGTCATATTCCAATTATCCGGTAAGAGTATACAGTCAGTTAGACTTAGCGTATTGAGTGCTCAAGGTTGCAGGAGGCTTAAGAGATTTCCATCTATCAAGTTGACCAATCTTGTACATCTCTGCCTTTCAAGATGCTCTAGTCTTGAACATTTTCCAAAAATGTTGGGAAAATTAAATGATATACTAACAATTTATTCGGATGGTACTCAGATAAAAGAATTGCCATCTGCTATTAAAAGGTTTTGTTTGATTAGCCATTCAAGTATGATAAAACATGGAGCAAGTTTCCCACCAGCACTAAGTCCCCCAATTGCCATGTCTCCAGATGAAGAGAAAGTGACTTCTGAGAGGTCTGAAGTAGATGTTGAAGAAGAACAAGGGAGTCCAATGGCACCTTTGGAGGCAAAACATTCTGCCTGCAAACTACCAGATTTGCTCCATGAATCTTTTACAACTTATCTTACCTGGTTTCGCAATGTGGAAGATTTAGACCTGTCAGAGCATAATTTCACAGTTCTTGATGAAAGCCTCAAAGAACTTTGCTCCTTGAGGTCACTTAGTTTGAATGGCTGCAGAGAACTTCGAGAAATTAAAGGGATTCCACCAAACATAAAGTATTTCTCTGCAAGAAACTGCATATCCTTGACTTACGCCAGCAAATACATGTTACTTAACAAGGAATTGCATGAGGATGGAGCCAAGGATTTTGTTCTTCCAAGTAGTAGCATCCCAAATTGGGTGGAGCATAGTAGCAACAATGATTCAATTTCTTTCTGGGTTCGCAACAAGCTTCCTGAAATCTCTTTATGTGTTCTTGTTGGACCTGCTGTTGATTTTTTGCGTACACACATTTGTCCGGAGTTTATCATCAACAGCAGCAGAGGTCAAGCGGAACATCTTGAATCAGTGGAGACATCCAATCAATTAGTGGATCATATATTTATTACTGATCCAAAATTGATGAAGTCCAAAGTGAATGAAGTGATTTAg 1698 0.3734 MRTSSSSRLKRWKMALEKIADLSGYHFKHGDGCEHKFVAKIVGHVSIEIKHATLPIVDHPVGLDSQVEKVISLLNVGSSDGVCVLGIHGIGGIDDIDQQEQLDALAGNLDWISPGSRVIITTRDTSLLSREIVRQESPKKPGKRSRLWLLEDIVQVFEMNMGSDKIEMIHMDFPKFEKVIRWDGEAFKKMRNLKTLFIRHTYFSQGPKYLPNWLRVLNWEEYPSPCLPLDFHPEGLVIFQLSGKSIQSVRLSVLSAQGCRRLKRFPSIKLTNLVHLCLSRCSSLEHFPKMLGKLNDILTIYSDGTQIKELPSAIKRFCLISHSSMIKHGASFPPALSPPIAMSPDEEKVTSERSEVDVEEEQGSPMAPLEAKHSACKLPDLLHESFTTYLTWFRNVEDLDLSEHNFTVLDESLKELCSLRSLSLNGCRELREIKGIPPNIKYFSARNCISLTYASKYMLLNKELHEDGAKDFVLPSSSIPNWVEHSSNNDSISFWVRNKLPEISLCVLVGPAVDFLRTHICPEFIINSSRGQAEHLESVETSNQLVDHIFITDPKLMKSKVNEVI 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03623 565 Gene3D - 1 56 IPR035897 -
Aip05g03623 565 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 93 IPR044974 GO:0006952
Aip05g03623 565 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 130 525 IPR044974 GO:0006952
Aip05g03623 565 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 93 129 IPR044974 GO:0006952
Aip05g03623 565 SUPERFAMILY L domain-like 178 456 - -
Aip05g03623 565 PANTHER ARCHAEAL ATPASE 130 525 - -
Aip05g03623 565 PANTHER ARCHAEAL ATPASE 93 129 - -
Aip05g03623 565 Gene3D Ribonuclease Inhibitor 159 331 IPR032675 -
Aip05g03623 565 Gene3D Ribonuclease Inhibitor 367 493 IPR032675 -
Aip05g03623 565 PANTHER ARCHAEAL ATPASE 14 93 - -
Aip05g03623 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 130 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03623 Aip-Chr5 144004800 144008219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03623 129 320 WRKY Transcription Factor Family AT4G12020 30.451 1.73e-19 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03623 - - ahf:112747389 809.29