Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03603 ATGGCTACTAGAAGATATGCTTTTGGGAGGGTTGATGAGGCAACACACCCTGATTCCATGAGGGCTACCTTAGCTGAATTTGCATCCACTTTCATCTTTGTCTTTGCTGGAGAAGGCACTGGCCTTGCTCTAGATAGGATATACAAGGATGAAGCATTCTCAGCTGGAGAACTGTTGTCACTTGCACTTGCACATGCATTTGCACTATTTGCGGCGGTTTCTGCTAGCATGCATGTCTCCGGTGGTCATGTCAACCCGGCGGTGACCTTCGGAGCTCTCATCGGCGGCAGAATCTCCGTCGTCCGTGCCATCTATTACTGGGTTGCTCAACTTCTAGGTTCTATAGTGGCTTCCCTCTTGTTGAGGCTTGTCACCAACAACATGAGACCAGGAGGGTTCCATGTGACATCAGGGCTTGGAGCAGGACATGGGCTTATACTTGAGATAGTGATGACATTTGGGCTTATGTATATAGTATATGCCACTGCTATTGATCCCAAAAGGGGTTCTATTGGGGCCATTGCACCTTTGGCAATTGGGCTCGTTGTTGGAGCAAACATCCTTGTTGGAGGCCCATTTGATGGGGCCTGCATGAACCCAGCACTTGCTTTTGGGCCTTCCTTGTTGAGCCTCCTCATACTCATCAACCTTTGA 654 0.4908 MATRRYAFGRVDEATHPDSMRATLAEFASTFIFVFAGEGTGLALDRIYKDEAFSAGELLSLALAHAFALFAAVSASMHVSGGHVNPAVTFGALIGGRISVVRAIYYWVAQLLGSIVASLLLRLVTNNMRPGGFHVTSGLGAGHGLILEIVMTFGLMYIVYATAIDPKRGSIGAIAPLAIGLVVGANILVGGPFDGACMNPALAFGPSLLSLLILINL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03603 217 Gene3D Glycerol uptake facilitator protein. 4 213 IPR023271 -
Aip05g03603 217 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip05g03603 217 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip05g03603 217 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip05g03603 217 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip05g03603 217 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip05g03603 217 Pfam Major intrinsic protein 14 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip05g03603 217 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Aip05g03603 217 PANTHER AQUAPORIN-8 1 209 IPR034294 -
Aip05g03603 217 SUPERFAMILY Aquaporin-like 13 210 IPR023271 -
Aip05g03603 217 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03603 Aip-Chr5 143693772 143695391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03603 2 209 Major Intrinsic Protein MIP AT1G17810 72.770 1.78e-96 280