Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03602 ATGTCAAGCTGGCTTATGCAAATTGCTCAACAAATCATGATCTTGCCTTTTAACATAACAACAATTCTTTACTATGTATCATTGTTTTTGTTTCTGTTTTTATTGTTTTTGAGCAACAATAACAAAAATAGTAGCCTGGTCTTGTGCAGTGATCAAAGTTTTTATCCACAAGAAAGAGAGGCTTTGTTGTTTATAAGGGATTCTCTAAATTCTTCCATTGATTTGCATGGGAATTGGGTTGGTCCACCATGCATTGGAGAAAATCAAAGCAAATGGTTTGGTATCACTTGTTCTAATTTTCATGTTGTTCACATTGTTCTTGAAGGGATTAACCTTAGTGGAACTTTGAAAAATCCTACATTCCTTCAAAACATTACTCTCTTGAAGAAACTCAGCTTCAGAAACAATTTGCTTCTTGGGATGCTACCAAATCTCACAAATTTGGTGTCTTTAGAAGAAGTGATCTTTTCAGATAATCACTTCTCAGGGAAAATTCCTTCTGGGTATGTTGATCTTCCTAGTCTAAGAGTTTTGGAGCTGCAAGAGAATTACTTGGATGGTCAAATTCCATCCTTTGATCAACCATCATTGGAAAGTTTCAACCTTTCATATAATCACTTGGTGGGGCCTATTCCTCAGACTCATGTGATTCAAAGGTTTCCAGTGAGTTCCTTTGACAATAACACAGATCTTTGTGGGAAGCCATTGGATAAGTTATGTCCTGAACCTTCTCCTTCTCCATCTCCTATGCCAGAACCAGAAGTTAGAAAAAATAAGAGACTCAAAGTTTGGATTATTGCTCTGATTGCTTCTTCTTCTGCACTGTTTCCGTTTCTGATCATCATTGCTTTGTTGTTTTGTAAAAGAAGGGCTAGTGCAGAAGAAACAAGAAGAAAAGATTCAAAAGATTCAGCAGGGTATGTATTTGGAGCATGGGCAAAGAAAATGGTGTCTCATTCCTTCAGTGAAGACTCTGAAAGATTAGGAAGATTGGAATTTTCCAACAAGAAGTTTCCAGTATTTGACTTAGATGATTTGTTAAGGGCATCAGCAGAAGTTCTAGGGAGGGGCAAATTGGGTATTACATACAAAGCAACACTTGAAAATGGTGCTCTTGTTGCTGTGAAGAAGCTTAGCTGCATGAATGAATTGAGCAAAAAGGAATTTCTTCAGCAGATGCAATTGCTTGGGAGCATCAAGCATGAAAATCTTGTAGAGATTATATCTTTCTATTATTCAGAGGAGCAAAAGCTCATCATTTATGAGCTTATGAATGATGGAACTTTGTTTGAGCTCTTACATGAGGGTAGAGGAATTGGAAGAATGTCACTTGATTGGAGCACAAGAATGTCCATTATCAAAGACATAGCAAAGGGTGTTGCATTTCTTCATGAATGTTTGCCATATCAAAAGGTCCCTCATGCAAACCTAAAATCAACCAATGTCCTAATCCAACAAGATGGCCAAGGAGCCTATAACCATTCCAAGCTCACAAATTATGGATTCTTTCCACTTCTAAGCTCAAAGAAGAAAAACCATGCTGAGAAACTAGCCATAAGCAAGTCAACAGAATTTGTCAAAGGGAAGAAACTAACACACAAAGCAGATGTTTATTGCTTTGGTATCATCATGCTTGAGATCATAACTGGGAAGATTCCTGGCCAAGTAACTAGTGCTAATGATGATGATATTGTAAGTGATCTTTCAGATTGGGTGAGAACTGTGGTGAACAATGATTGGTCCACAGATATATTGGATTTAGAGTTATTAGCAGAAAAAGAAGGGCATGATGCAATGTTGAAGTTAACTGAATTAGCACTAGAATGCACTCATGTTATACCACATAATAGGCCTAAGATGAGTCAAGTGTTAAGGACAATACAAGAGATAGAACAAAATCACAAGAGCCAATAA 1914 0.3704 MSSWLMQIAQQIMILPFNITTILYYVSLFLFLFLLFLSNNNKNSSLVLCSDQSFYPQEREALLFIRDSLNSSIDLHGNWVGPPCIGENQSKWFGITCSNFHVVHIVLEGINLSGTLKNPTFLQNITLLKKLSFRNNLLLGMLPNLTNLVSLEEVIFSDNHFSGKIPSGYVDLPSLRVLELQENYLDGQIPSFDQPSLESFNLSYNHLVGPIPQTHVIQRFPVSSFDNNTDLCGKPLDKLCPEPSPSPSPMPEPEVRKNKRLKVWIIALIASSSALFPFLIIIALLFCKRRASAEETRRKDSKDSAGYVFGAWAKKMVSHSFSEDSERLGRLEFSNKKFPVFDLDDLLRASAEVLGRGKLGITYKATLENGALVAVKKLSCMNELSKKEFLQQMQLLGSIKHENLVEIISFYYSEEQKLIIYELMNDGTLFELLHEGRGIGRMSLDWSTRMSIIKDIAKGVAFLHECLPYQKVPHANLKSTNVLIQQDGQGAYNHSKLTNYGFFPLLSSKKKNHAEKLAISKSTEFVKGKKLTHKADVYCFGIIMLEIITGKIPGQVTSANDDDIVSDLSDWVRTVVNNDWSTDILDLELLAEKEGHDAMLKLTELALECTHVIPHNRPKMSQVLRTIQEIEQNHKSQ 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03602 637 Gene3D Phosphorylase Kinase; domain 1 313 423 - -
Aip05g03602 637 Gene3D Ribonuclease Inhibitor 55 242 IPR032675 -
Aip05g03602 637 Pfam Protein kinase domain 351 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03602 637 SUPERFAMILY Protein kinase-like (PK-like) 351 631 IPR011009 -
Aip05g03602 637 Gene3D Transferase(Phosphotransferase) domain 1 424 637 - -
Aip05g03602 637 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 43 632 - -
Aip05g03602 637 Coils Coil 620 637 - -
Aip05g03602 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 43 632 - -
Aip05g03602 637 SUPERFAMILY L domain-like 55 214 - -
Aip05g03602 637 ProSiteProfiles Protein kinase domain profile. 348 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03602 Aip-Chr5 143685238 143688299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03602 82 637 Receptor kinase-like Gene Family AT5G05160 34.333 1.30e-101 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip05g03602 Pkinase 1.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03602 - - aip:107641436 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03602 05 143685238 143688299 Aip05g03602 05 143685238 143688299 ECH