Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03595 ATGGAGGAAGTTCAAGTCAGCCCTCCAAATTCAATGGAGATTCGTATTAAAGTTGTCTCCACCTCTCTCTGTCGCAGCGACCTTGCAGCCTGGGAATCTCATGCTATATTTCCTCGCATATTTGGTCATGAAGCATCAGGGATTGTTGAAAGTGTGGGGGAAGGTGTGACTGAATTCAAGGAGGGGGACCATGTGCTAACAGTCTTCATCGGAGAATGCAAGGCGTGCAGGCCGTGCACGTCCGGTAAAAGCAACATTTGTCAAGTTTTGGGATTGGAGAGAAAAGGTTTGATGCATAGTGATCAGAAGACACGCTTCTCTGTCAAAGGGAAGCCTGTATATCATTATTGTGCTGTTTCAAGTTTCAGTGAGTATACGGTAGTCCATTCCGGATGTGCAGTGAAAGTTAGCCCACATGTACCTCTTGAGAAAGTGTGCCTTCTGAGCTGTGGAGTTGCTGCAGGTCTAGGCGCAGCATGGAATGTTGCTAATGTGACAAAAGGATCAACTGTGGTGATATTTGGTCTCGGAACTGTTGGCCTTTCTGTTGCACAAGGTGCAAAACTAAGGGGAGCATCTCGAATAATTGGCGTGGATAACAATCCACAGAAGTGTGAAAAAGCAAAAGCTTTTGGATTTACAGAAGTTGTTGACCCGAGTTCCTACCAAGAACCTATTGCTCAGGTTATTAAGCGCATTACTGATGGTGGAGCAGATTTTTCTTTCGAATGTGTAGGCGACACTGACATGATAACCACTGCATTGCAGTCCTGTTGTGATGGATGGGGTTTGACAGTAACACTTGGTGTGCCAAAGGTGAAGCCTGAGATGTCAGCTCACTATGGACTATTCTTAATGGGAAGAACACTCAAGGGATCTCTATTTGGAGGATGGAAACCTAAATCAGATCTTCCTTTATTAGTAGAGAAGTATGTGAACAAGGAAATTCAAATTGATGACTACATAACACACAATTTGCCATTTGATGACATTAACAATGCTTTTGATCTCATGAAGGAAGGAAAGTGTCTGCGTTGTGTTATTCATATGCCAAGATAA 1059 0.4363 MEEVQVSPPNSMEIRIKVVSTSLCRSDLAAWESHAIFPRIFGHEASGIVESVGEGVTEFKEGDHVLTVFIGECKACRPCTSGKSNICQVLGLERKGLMHSDQKTRFSVKGKPVYHYCAVSSFSEYTVVHSGCAVKVSPHVPLEKVCLLSCGVAAGLGAAWNVANVTKGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPQKCEKAKAFGFTEVVDPSSYQEPIAQVIKRITDGGADFSFECVGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLFLMGRTLKGSLFGGWKPKSDLPLLVEKYVNKEIQIDDYITHNLPFDDINNAFDLMKEGKCLRCVIHMPR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03595 352 SUPERFAMILY GroES-like 301 349 IPR011032 -
Aip05g03595 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 140 314 IPR036291 -
Aip05g03595 352 Pfam Zinc-binding dehydrogenase 179 299 IPR013149 -
Aip05g03595 352 SUPERFAMILY GroES-like 1 160 IPR011032 -
Aip05g03595 352 Gene3D - 1 345 - -
Aip05g03595 352 PANTHER ALCOHOL DEHYDROGENASE 1 350 - -
Aip05g03595 352 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 42 56 IPR002328 GO:0008270|GO:0016491
Aip05g03595 352 Gene3D - 155 293 - -
Aip05g03595 352 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 1 350 - -
Aip05g03595 352 Pfam Alcohol dehydrogenase GroES-like domain 13 135 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03595 Aip-Chr5 143533845 143536477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03595 13 87 Monolignol Biosynthesis Gene Families AT2G21730 39.241 1.68e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03595 K00001 - gmx:100819938 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03595 05 143533845 143536477 Aip05g03595 05 143533845 143536477 ECH