Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03591 ATGTTGAAACATTACTCCACATTCATCATGGTGTTTGCCCAAGAAATGgacttgggtagagaaattgtccgacaagaatcaccaaaagagcctggaaagcgtagcagggtgtggcactgtgatgatagtcaggatattttggtagaaaataagGGAAGTGGTCAAATTGAAATCTTACAAGCAGAATTTCCTAAAATTAAAAGCTTGCTAGAAGAATGGGATGGTGGGGCATTCAAGAAGATGGATAACCTCAAAACACTGATTATTTGTTATTCTCATTTCGTCCATGGTCCCAGACACCTTCCAAATAGCCTTCCAAACAGCCTAAGAGTATTGATTTGGAAGGGTTATTCTTCAGAGTTTTTGCCTTCTGATTTTTATCCAAAGAAACTTTCATGGTTGGATTTAAGCCATAATTGGTTATTGCCTGTCAATTTGTTTAGGATGCTGGAGAAATTCGTCAAGTTGAGAGTTTTGCATCTTGATGACTCTCCATTGCTTGAACAGATACCTGATATGTCTGCTCTCCCAAATTTAGAAGAACTATCATTTGTTCGGTGTAAATATTTAGTTAAGATTGACAAATCAGTTGGGCTGCTGGATAAACTCAGAATCCTGAATGCTGAAGGTTGCATCAATCTCCGGAGTTTTCCTCCCATCAAGTTGATCTCTCTTGAATATCTCAATCTTTCACATTGCTCAAGTCTGGAGAGTTTTCCAGAAGTACTAGGAGAGATGAGAAACTTAATGGAGCTTGTGTTGCATAATACTCCCATAAAAGTGTTTCCATTTTCAATTCGGTATTTTACTCGAATTCGGAGTTTGCTACTGCAGAACTCCACAACTGTTAAATTACCAAGAAGCATTTTTGTGTTGGCAGAACTTACACATTTGAGCATTAAGTGTGATGGGTTGCTGGAAATAAGAGGGATTCCACAGAATGTAGAAGTTTTGGATGTACCAAGCTGCACAACTTTGACTTTCTCATGTAGAAGCATGACATTGCTGAATCAGGAGGAGGGTGGAGAGGAGTTTTGGTTGCCAGTGAAAAGGCCAAAGATTCTAGAGTGGCTCAACCACTATTGCTGGGGATCTTCAATTTCCTTCTGGTTTCGTAACAAGTTCCCTGCCATGTTTCTCTCTGTCATAAGTGGAGACAATATACTATTTTGCCCAGAATTGAAGATCAACAACCGCGAAGTGCATTACAGTTTTTGGCTGGAAAAATACAATAAATTAATTCTGAATGTGAGTAAAGAGTTAATAAAAAACAAAGATAAGATGACTGGTGTACTTCTAAAAAATGAATGGAATCATGTGGAGTTGACATATTCTAAGGTCAATCATGGGCCTGTCATTCAAACTGGATTCCATTTATTTGAAAGAAGTAGTAGCATGGAGGATATTCAATTCACTGATCCACTGAAAGAAGAGCAGAGAGTGGTGGAAAGGGAACATTCTCAGAGACAATTTATGCAGCAGAAACAAATGTTGGCTTTAGTCGATCCGTATATGGGACAATGCAAAGTTTTGCTTTCATTGCTTCCGCCTCCAGAATTCGACAATAAAAAGAATTACTCAAACTCAATGGCTTCAGAGCAGTTAAGATGCTCCACTCTTGTCCCACTCCCAGTATCCCAGGATTGTCTAGCAAAGGCTCCAGGAGAATCATCTCAAGCCCCTTTTGATGAGATTCAAAGTGGAAAACTTAGTGGACAAGAAATATACGTGAAAACCTGTTCCACTGGATTGCCAACAACATTTGACAAGTCTTACATAAATCAAGTTCCTCTAATTCAAGATGATACAGAAATGGAAGCATTTTATTCTTCTCTTGATGTTAGGAGCCATGTTCTTTCATGTTCCCAAGATAATTTGTCCGCTAATGCTCTAAGCGAAGAGACCAGGGAAGCAATAAAAATAGTAAAATACTTCATCTCCGGCGATGCTTCGGTTCTGTTGCATCAACAACAGTACAGTGCAGTGAGAACTAGCTTAGAGTACCTTTCCAATTTGTCTGCAGATGATGGCCTATCAGGACGAGTGCTAACTTTGATATCAGAAGCTTCATGGTTCTTGACCCATTGGAGTAAGGATTTCGTAGAAGCAAGCATGAAATTTGAGTACACGACATCCGAGCTGCAGAAAGCTGATGCATTGGAAGCAGGTCTAGAAGCTAACAAGAATCAGTTCAAAGAAGCTGTAGCCATGGAAAATGAGCTGCACCAAAAGTTAGCTTGGATTGAAAAAGGTAAAATGGGACAAGAAGAGCATATCAAAATTGTTGAAGCCAACTTATCTGCTTATGAATCAGAAAAGAATATGGCCCTGAAGAGGAAGAGAGATATCTTTGAAGAAGGGAAGACACTTAAAGCTCAACTAGACAAGTGGAGGGGTGAAAAAGTGCCACGTTTGAGGCACGAGCAGGGTCTAGCAAAGGCTATTCAAGCAAAAATCTCAGCTGAATGGTCAAATCTTGGAGAAAAATTTAAGACCATTGTTGTGGACTGA 2511 0.3775 MLKHYSTFIMVFAQEMDLGREIVRQESPKEPGKRSRVWHCDDSQDILVENKGSGQIEILQAEFPKIKSLLEEWDGGAFKKMDNLKTLIICYSHFVHGPRHLPNSLPNSLRVLIWKGYSSEFLPSDFYPKKLSWLDLSHNWLLPVNLFRMLEKFVKLRVLHLDDSPLLEQIPDMSALPNLEELSFVRCKYLVKIDKSVGLLDKLRILNAEGCINLRSFPPIKLISLEYLNLSHCSSLESFPEVLGEMRNLMELVLHNTPIKVFPFSIRYFTRIRSLLLQNSTTVKLPRSIFVLAELTHLSIKCDGLLEIRGIPQNVEVLDVPSCTTLTFSCRSMTLLNQEEGGEEFWLPVKRPKILEWLNHYCWGSSISFWFRNKFPAMFLSVISGDNILFCPELKINNREVHYSFWLEKYNKLILNVSKELIKNKDKMTGVLLKNEWNHVELTYSKVNHGPVIQTGFHLFERSSSMEDIQFTDPLKEEQRVVEREHSQRQFMQQKQMLALVDPYMGQCKVLLSLLPPPEFDNKKNYSNSMASEQLRCSTLVPLPVSQDCLAKAPGESSQAPFDEIQSGKLSGQEIYVKTCSTGLPTTFDKSYINQVPLIQDDTEMEAFYSSLDVRSHVLSCSQDNLSANALSEETREAIKIVKYFISGDASVLLHQQQYSAVRTSLEYLSNLSADDGLSGRVLTLISEASWFLTHWSKDFVEASMKFEYTTSELQKADALEAGLEANKNQFKEAVAMENELHQKLAWIEKGKMGQEEHIKIVEANLSAYESEKNMALKRKRDIFEEGKTLKAQLDKWRGEKVPRLRHEQGLAKAIQAKISAEWSNLGEKFKTIVVD 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03591 836 Gene3D Ribonuclease Inhibitor 50 345 IPR032675 -
Aip05g03591 836 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 282 IPR044974 GO:0006952
Aip05g03591 836 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 285 390 IPR044974 GO:0006952
Aip05g03591 836 Coils Coil 759 779 - -
Aip05g03591 836 SUPERFAMILY L domain-like 24 327 - -
Aip05g03591 836 PANTHER NB-ARC DOMAIN PROTEIN 17 282 - -
Aip05g03591 836 PANTHER NB-ARC DOMAIN PROTEIN 285 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03591 Aip-Chr5 143459150 143463410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03591 19 300 WRKY Transcription Factor Family AT4G12020 35.906 5.63e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03591 - - ahf:112749323 1077.77