Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03590 ATGgtagggattcatggcattggcggaataggtaaaacaactcttgcTCGCGCCGTCTACAATTCCATTGCTGACTCATTTGAAGGTGTATGTTTTCTTGGTAATGTGAGAGAAAATTCAATAACACATGGCTTAGTATATCTCCAACAAATGCTGCTTTCAAAGTTAGTTGGTGATGAAAGAGATGTTAAGTTAGGTGATGTCAGTGAAGGAAAGAAGGTGATAGAGCGTAGGCTCAATCGAAAGAAGGTTCTGTTGATTGTTGATGATGTCGATAGATTAGAGCAGTTAAAAGCAGTTGCAGGGGACTCTGTTTGGTTTGGTTCTGGTAGTAGAATCATTGTAACAACTCGAAACAAAGGCTTGTTAACGAGTCATGGAATTGTAAGAACATATGAAGTAGGGAAGTTAAATGATAAAGAAGCTCTTGATTTACTTAGATGGAATGTTTTCAAAACAAGAGAGGTTGATCCAAGTTACTCATACATTTTGAACAGAACGGTTGCTTTTGCTTCTGGCTTGCCACTTGCATTGGAAGTAATAGgggctaatttgtttggtaagagtaaagatgagtgggaatctgctttggatcagtataaaagaagtcctaagagagagattcaagagattcttaaagtgagttttgatggattggaggaggaagagaagaagatctttcttgacattgcttgtttctttaatggatatagatccaagtatgttgaggagatactgcgtgctcatcacggcttttgccccaagaacagcatgcgagttttgattgataagtctttggtgaagattgaagatgataaagtgatgttacatgatttgattcaagatatgggtagagaaatcgttcgacaagagtctgaagagcctcgagggcgtagcaggatttggaactttgaggatgcaaaacgtgttttggaacaagacaagCAGGGTAGCCATAAAATTGAAATGATAAAGCTAGCATTCCCCAAAGCTGATGAAAAACTTAATTGGGATGGTGTAGCATTCATGAAGATGAATAATCTCAGAACAATTGTTATTAATAAAGGTGACTTTTCAGACAGTCCCAAACATCTTCCAAATAGTTTGAAAGTGCTTAAATGGCGAGGATATCCTTCACAAATTTTCCCATTTGATTTTTATCCAAAGGAAATAGCCATATTGTGGTTACCAGATAGTTCCATATCATCACTCATTAGTTTCTTTCAGAAGCAAAAGTTCATGAATTTGAGAGTTTTGAATTTCAGCAATTGCCAGCACCTAGAACAAATACCTGATTTATCTGTTGCCCCACATTTGGAAGAATTGTCTTTTTGTTGGTGTAAGAACTTAACTGAAGTTCATAAATCAGTTGGGTTGCTAAATAAACTTAGAATGTTGGATGCAAAGGGTTGTTGCAAGCTTAGGAGTTTTCCAGACCTTATGTTGCCTTCTCTCGAGAAACTCCGCCTTTCGTCTTGTTCAAGTCTTAAGAGTTTTCCAGAAATATTAGGGAAGATGGAAAGTTTAACACAACTTGAGTTAGAATACACTCCAATAAAAGAATTCCCACCTTCAATTCGTTATATTACTAGGCTTGAAAGATTAGAATTGTGGAACTCTAAGATTGTTCTGTTGCCAAGTAGCATTTTTCTGATGAAAGAGCTTAAGTGCTTGAGAATTCGAAACTGTGATGGTTTGCTGTTACATTCACAAGAGAAAGTTGAGGAGCAAATAAGCTCAGTTGTGTTTTCCAATCAGCAACACTTTGATTTCAGAAACTGCAATGTATCAAATGAGTTTCTTCAAAGGAGTGTTCCTTGGTTAGTCAATGTGAAAGAGCTGAATCTATCATCCAACAGTTTCACAATTCTTCCTGCATGCATTGAAGGATGTACCTTCTTGAAGGTACTTATTTTGGATTATTGTGGGAATCTTCGAGAAGTCGGAGGGATTCCACCAAACATTGAAAAATTCTCTGCAAGAAGATGCATATCCTTAAAAAGTTTGGACCTCACTCTCCTATCATGCACCAAAGATTGTTACTTTCTGAAGGAACTCATTTTGGATGGTTGTGAGAATCTTGAGGAAATAAGGGGCATTCCACCTAGCATAGAAGTTTTGCATGCACCAAGCTCTACCTTGTTGACTTCCTCTTCTAGGAGCATGTTTTCTAACCAGGATTTACATGAGGATGCAAATGACAAGGAATCATGGCTGCCAATGCCAGGAACAAAAGTTCAGGAGTGGTTCAACTATTCTCGCCACGGATCATCAATTTCTTTCTGGTTTAGAAACAAGTTTCCAGCCATGTCACTCTTTGTGATTAATGAACTGAAAAAGACTTCATTTGAACCCAAGTTGACCATCAATGGTCATGAAATGCATATTTTTTCCTTATTCTCTCTACAAAAAGATCACATACTGATTCTAACTCTGGGTCCAAAACAAACTGAATTCAAAGATGAGGTAAACAATGTGATTTCTAAAGATGAATGGAATCATGTGGAGTTGTCTTCTGATCATGCAGTGCATGGAGTAGGTGGTGGAACTATATATGAGAGCATGATGCAAATTGGACTCCATGTATTCAAGCAATTTAGTAACATGGAAGATATAAGATTCACTGATCCGTTCTTGTTGGAAGAAGTTCATAGCTTGGAGGGTATTGGATATTCTCCTACACAATTTGTGCAAAGGCATCAAAATTTGACTTCATTGGAAACAAATGTGGAGCAAGAAATAGTATCTCATTCATTGCTTCCATCTCCATCATTCAGTGACAACTTGAATTGGGAGTCAAACACAATTGTTACGGAGCACAAAACTAACACAACTAGTGTCCAAGCATATGAGGATAATCTAGCAAATGCTGTAGGAGAATCATATCAAACACCATCCATAGCTAACACAGAAAACGTTCATGACCCAATTCCCACCACTCCATCAAGTAGTGATAAAGATAGTGGACAGAAAATGTACACAGAAACTTGTAGCACCACTTTGCTAATAAAATTTGATGAGCCTTTGATAAATCAAGCTCCTCTAACTCAAGATGATAATGATGTGGAGATGGAAGCATTTTATGCTACTCTTGATGCTGAGACACATGATGATGTTCTTTCCCCGAATTCCGATGATGATCCAGCAACCACCACTGCTCCAAGCAAAGAAGCCAAGGAAGCATTGAAAACAGTACAAGACTTCATCACAAAGAATGATGCTTCAGTTTTGTTGGATGAAGAAAACTACAATGTCATGAAGAACAGTTTGCATTACCTATCCAATTTGTCTTCAAAAGATGGCATATCAGGAGAAGTTGAAACATTGGTATCAGAAGCTTCATGGTTGTTCAATTGTTGCAGTGTGGAATACATTGAATCATGTAGGAATATTGAGTCCACAGCATCAGAGCTACAAAGGGTTGATGAATTAGAAGCAGGATTGGAAGGAAACAAGAACAAGCACAGGGAGTTGAGGCAAAAGTTAGATTGGATGGAGAAAAGAAAGAAGGAGCTGGAAGAGGAAATGAATGCCATCAAAGCTAAGTTATGTGATTGTGAATCAGAAAAGAAGATTGTTGTTCAGAAAAAGAAAGATGTATTTGAAGAAGCAAAGACACTCAAAGCTCAAAGAGATGAGTGGAGGAAAAAAGTGCCACAATTGCGGCATCAACAGAGTATAGCAAAGAGTAATCATGCAAAATTCACAGGAGGAGGAGAAGAAGAGCTGCAGGGTGGCCGGCGACGACGTCTTAGACAGCGTTGCGAGGACAGTGGGGGGACTCGCGGTGGTGCGTTGCGACGAGTGGAGGAGTCTCACGGATCGAAGGAGTTGATTGCGCGTCGCAAATGGGGACCTGGTGGTGGTGGCTGTGTCGCGACAGATAGAGAGTTGTGGGGTACAAGTAGCGAGCGATGGGGAGTCGCGAGCGGCAAGGGTGCGTTGGGCAAGCGATAG 3957 0.3495 MVGIHGIGGIGKTTLARAVYNSIADSFEGVCFLGNVRENSITHGLVYLQQMLLSKLVGDERDVKLGDVSEGKKVIERRLNRKKVLLIVDDVDRLEQLKAVAGDSVWFGSGSRIIVTTRNKGLLTSHGIVRTYEVGKLNDKEALDLLRWNVFKTREVDPSYSYILNRTVAFASGLPLALEVIGANLFGKSKDEWESALDQYKRSPKREIQEILKVSFDGLEEEEKKIFLDIACFFNGYRSKYVEEILRAHHGFCPKNSMRVLIDKSLVKIEDDKVMLHDLIQDMGREIVRQESEEPRGRSRIWNFEDAKRVLEQDKQGSHKIEMIKLAFPKADEKLNWDGVAFMKMNNLRTIVINKGDFSDSPKHLPNSLKVLKWRGYPSQIFPFDFYPKEIAILWLPDSSISSLISFFQKQKFMNLRVLNFSNCQHLEQIPDLSVAPHLEELSFCWCKNLTEVHKSVGLLNKLRMLDAKGCCKLRSFPDLMLPSLEKLRLSSCSSLKSFPEILGKMESLTQLELEYTPIKEFPPSIRYITRLERLELWNSKIVLLPSSIFLMKELKCLRIRNCDGLLLHSQEKVEEQISSVVFSNQQHFDFRNCNVSNEFLQRSVPWLVNVKELNLSSNSFTILPACIEGCTFLKVLILDYCGNLREVGGIPPNIEKFSARRCISLKSLDLTLLSCTKDCYFLKELILDGCENLEEIRGIPPSIEVLHAPSSTLLTSSSRSMFSNQDLHEDANDKESWLPMPGTKVQEWFNYSRHGSSISFWFRNKFPAMSLFVINELKKTSFEPKLTINGHEMHIFSLFSLQKDHILILTLGPKQTEFKDEVNNVISKDEWNHVELSSDHAVHGVGGGTIYESMMQIGLHVFKQFSNMEDIRFTDPFLLEEVHSLEGIGYSPTQFVQRHQNLTSLETNVEQEIVSHSLLPSPSFSDNLNWESNTIVTEHKTNTTSVQAYEDNLANAVGESYQTPSIANTENVHDPIPTTPSSSDKDSGQKMYTETCSTTLLIKFDEPLINQAPLTQDDNDVEMEAFYATLDAETHDDVLSPNSDDDPATTTAPSKEAKEALKTVQDFITKNDASVLLDEENYNVMKNSLHYLSNLSSKDGISGEVETLVSEASWLFNCCSVEYIESCRNIESTASELQRVDELEAGLEGNKNKHRELRQKLDWMEKRKKELEEEMNAIKAKLCDCESEKKIVVQKKKDVFEEAKTLKAQRDEWRKKVPQLRHQQSIAKSNHAKFTGGGEEELQGGRRRRLRQRCEDSGGTRGGALRRVEESHGSKELIARRKWGPGGGGCVATDRELWGTSSERWGVASGKGALGKR 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03590 1318 Coils Coil 1141 1182 - -
Aip05g03590 1318 MobiDBLite consensus disorder prediction 968 991 - -
Aip05g03590 1318 MobiDBLite consensus disorder prediction 1034 1058 - -
Aip05g03590 1318 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 675 837 IPR044974 GO:0006952
Aip05g03590 1318 Pfam NB-ARC domain 1 210 IPR002182 GO:0043531
Aip05g03590 1318 PRINTS Disease resistance protein signature 171 185 - -
Aip05g03590 1318 PRINTS Disease resistance protein signature 78 92 - -
Aip05g03590 1318 PRINTS Disease resistance protein signature 1 16 - -
Aip05g03590 1318 PRINTS Disease resistance protein signature 480 496 - -
Aip05g03590 1318 Gene3D - 136 220 IPR042197 -
Aip05g03590 1318 Coils Coil 1197 1224 - -
Aip05g03590 1318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 230 IPR027417 -
Aip05g03590 1318 Gene3D Ribonuclease Inhibitor 341 497 IPR032675 -
Aip05g03590 1318 SUPERFAMILY L domain-like 276 701 - -
Aip05g03590 1318 Gene3D Ribonuclease Inhibitor 498 717 IPR032675 -
Aip05g03590 1318 MobiDBLite consensus disorder prediction 1225 1296 - -
Aip05g03590 1318 MobiDBLite consensus disorder prediction 1241 1280 - -
Aip05g03590 1318 Gene3D - 1 129 IPR027417 -
Aip05g03590 1318 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 670 IPR044974 GO:0006952
Aip05g03590 1318 PANTHER ARCHAEAL ATPASE 675 837 - -
Aip05g03590 1318 PANTHER ARCHAEAL ATPASE 1 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03590 Aip-Chr5 143447346 143456909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03590 2 671 WRKY Transcription Factor Family AT5G45050 30.932 7.32e-67 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03590 - - aip:107641428 2426.74