Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03582 atgagtataaaagaattcctaataaagatatccaaaagaaacttaaaagtaagttttgatgctttggaggaatatcatcagaaactttttcttgacattgcttgttgcttcaaaggatatagttttgatgatcttgaaaatgtactccatgctcttcatgatgttagcccgacacgtggtattcgagtattggctgaaagatctctaataaatattgataaggatggccatgtgacacagcatgacttgattcaagatatgggcagagaaattgttcggcaagaatcaccaaaaaatcctggtaaacgtagtcggttatggcttcctgaagatataatacgagttctacaagagaatattGGAACCAATGAAATTGAACTCATAATTCTGCAAGCTCCCACGTCTGAAGTAATAGAATGGGATGGAGAGGCTTTCAAGAAGATGGAAAACCTCAAAACACTTATTATTCTAAGTGGCAATTTTTCCAGAAGTCCCAATTATCTTCCAAATAGTTTAAGACTGTTGGAATGGCGGGAATATCCTTCATATTCTTTACCGGTTGATTTTCATCCAAAGAAGCTTGCCATACTCAAGTTGCCCAAAAATTGCTTAACACTGCTCCGGCTAGTTAAAGTATTAAAGGAGTTTGTGGAGATGAGTGTTTTGGATTTTAGTTGGAATGATTGGATAAAACATATCCCTGATGTTTCAGGTGCCCCAAATTTACAAGAATTAAACTTTGCATGTTGTGGCAATTTGATTAACGTTGATGAGTCAGTTGGATATTTGAGTAAACTTAGATCATTGGATTTTCAAGGTTGTACAAAGCTTAGGAACCTTCCTTCCCTTATGTTACCATCTCTTAGAAAACTCACTCTTGTGAATTGTTCAAGTCTTGAGAGTTTTCCTGAAATATTAGGAAAAATGGAAAAGATTACATATCTTGATCTATATTTCACTTCCATAAGAGAATTGCCATATTCCATTTGTAACCTTACTCGGCTTCAAGAATTCGATCTGCGTGATGGTGGAACTGTTCTATTGCCAAGTAGCATTTTCATGTTTGGAGAACTTCTTGAGCTGAAATTTCGTGGATATAAGAGTTTGCTATTATCTAATGAAGGTGGTGTGGAGCAAATGCCCTCAGTGTCAGCATCATCAACCACAAAACGCATTGATTTGTCTTCATGCAATATGTCAGATAAATTCCTCCAAATATTTATCTCTCAATTTTCCAATGTGCAAGAGTTGAACTTGTCAGAAAGTCATTTCACAATTCTCCCAGAATGTATCAAAGATTGTCACCTTTTGAGAATTCTTTATCTGACTGGCTGTAAGAATCTTCAAGAGATTAGAGGGATTCCACCCAACATGGAAATCTTGAATGCAACTGACAATACATCCTTGAATTGTTCAAGTAGAGAAGCATTATCGGATAAGAAATTGCATGATGAGGGTAGAAAGAGGAGATTCATTTTGCCAGGAACAAGGATACCAAGTTGGTTTGAGCATCAGAGGAGTGGAGAATCAGTTTCTTTCTGGTTCCGTAATAAGTTCCCTGCCATATCACTTTGTTTTCTTTTCACGGAAGCACTTGAATTTGATGATCAATGTTCTCTTTTCCCTCATCTAAAATTGGTCACCCATGATAATGACAATGGTGGGTGCATATTTAGTGATCAAAATCAAAGTTGCCCGCGTGCTACTTGCGGCCATAATAGGATTTATGATTTAGAAGATGATGAGGGTCAACAGTTTCAACAAAATGAATGGAATCAAGCGTTGGTCTCTCTTTCAGTTGAAGATAAGTCGGGTGAGAGGGAACTGAGGCCAGAGGAGTGGGGCAGCATAGAAATTGGAGTGCATATAATAGAAAAAAGAAGTAGCATGGATGATATCCAATTCACTCTTCCACTTTTGGACAAAGATCATCATAAAGCGCTGCAGATGAAAGATTCTCACAAGCACCATATGCAGCAACAACAAACAAGTTTGCCTTCATTGCAACCGGTTGATAATCTGAATTGGGACCCTCGTTCCTACATCGTTCGCAGACTTTACATTAAACCCAATAGATCAGAGCTCGCGTTATGGTCTTATGTCACCGGTGTTTCTTTATGCACCACTCAGACCCAAGACCACATGCCATCTTCAAAAGAGGCTCCAGGTGAATCTTCTCGTACCTCGTGTCGTGGGGATACTCTAAATATTCATGGCTCAAGTCCCCTGTCATTAAGTGGCAAGGCTAGTGAAGAAGATGTACCTTCAATATCCAGTTATACTGCTTCATCAACACCAACTGACAAATATTTGGGCGATGAAAATGTAACAAGTGATGATGATGATGTAGAAATGAATGCCTTTTATGCTTCACTAGATGTTTCTGGCATCCCTATGCTTCCTTGTTCCCGTGATAAGTTGGTCACCACCACTGTTTCGAAAGATAAAGAGGCCAGAGAAGCATTGAGATCAGTACAACACGTCATCTCGCATGATGCTTCAGTTTTGCTGCATCCTGAATTGTGCAGTATCTTGAAAGCCAACCTAGATCACCTCTGCAAGTTATCTGCAGATCATGGCAGAATATCAAGAGAAGCTAGCAAAGTGATATCGGAAGCTTCACGGTTTTTGACTCATTGGAGTAGGGACTACAGTGAAGCAAGTGTGAAAATTGATTCTATAATGTGTCATTTGCAGAAAGCTGATGAACTGGAAATGAGTCTGGAAATCTTTGAAGTTGTGAAAGTGAGCATGGAAGATCGTCGTTTATCACTGGCATTGTCCTCCCACTCCCCATCCTCAGACTACGGATGGGACTACGACGTGTTCCTCAGATTCCGAGGTCTAGACACCGGCAAGCACTTCGCCGGAAATCTCTATTACGCTCTCAAACAGAGGGGAATCCGGACGTTCTTTGCTGACAGAGAGCTTGAGGAAGGAGAGGAGCTCACGCCAACGCTCCTCAAGAGAATTCAAGATTCGAAAACCGCCATCGCAGTGTTATCTCCAGGTTACGCTGATTCTGCATTttgtgaaatatatttgaaatctctcatggttgaaaaaTTGGTTTTTCCGGTGTTCTACGGTGTAAGTGCTTCTGATGTTCGACGTCAGACTGGAGATTACGAAAAGGCAATGGCTAAGCATCAAAGTAGGAATGACCACCACGTCGTGCAGAAATGGAGAGAAGCTCTTAGCAAGCAGCCTAACTTGTCCGGCAGCAGTTTCAAATTTCGGAGGCCTCAAATGACAAGAACATGA 3264 0.36 MSIKEFLIKISKRNLKVSFDALEEYHQKLFLDIACCFKGYSFDDLENVLHALHDVSPTRGIRVLAERSLINIDKDGHVTQHDLIQDMGREIVRQESPKNPGKRSRLWLPEDIIRVLQENIGTNEIELIILQAPTSEVIEWDGEAFKKMENLKTLIILSGNFSRSPNYLPNSLRLLEWREYPSYSLPVDFHPKKLAILKLPKNCLTLLRLVKVLKEFVEMSVLDFSWNDWIKHIPDVSGAPNLQELNFACCGNLINVDESVGYLSKLRSLDFQGCTKLRNLPSLMLPSLRKLTLVNCSSLESFPEILGKMEKITYLDLYFTSIRELPYSICNLTRLQEFDLRDGGTVLLPSSIFMFGELLELKFRGYKSLLLSNEGGVEQMPSVSASSTTKRIDLSSCNMSDKFLQIFISQFSNVQELNLSESHFTILPECIKDCHLLRILYLTGCKNLQEIRGIPPNMEILNATDNTSLNCSSREALSDKKLHDEGRKRRFILPGTRIPSWFEHQRSGESVSFWFRNKFPAISLCFLFTEALEFDDQCSLFPHLKLVTHDNDNGGCIFSDQNQSCPRATCGHNRIYDLEDDEGQQFQQNEWNQALVSLSVEDKSGERELRPEEWGSIEIGVHIIEKRSSMDDIQFTLPLLDKDHHKALQMKDSHKHHMQQQQTSLPSLQPVDNLNWDPRSYIVRRLYIKPNRSELALWSYVTGVSLCTTQTQDHMPSSKEAPGESSRTSCRGDTLNIHGSSPLSLSGKASEEDVPSISSYTASSTPTDKYLGDENVTSDDDDVEMNAFYASLDVSGIPMLPCSRDKLVTTTVSKDKEAREALRSVQHVISHDASVLLHPELCSILKANLDHLCKLSADHGRISREASKVISEASRFLTHWSRDYSEASVKIDSIMCHLQKADELEMSLEIFEVVKVSMEDRRLSLALSSHSPSSDYGWDYDVFLRFRGLDTGKHFAGNLYYALKQRGIRTFFADRELEEGEELTPTLLKRIQDSKTAIAVLSPGYADSAFCEIYLKSLMVEKLVFPVFYGVSASDVRRQTGDYEKAMAKHQSRNDHHVVQKWREALSKQPNLSGSSFKFRRPQMTRT 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03582 1087 MobiDBLite consensus disorder prediction 710 772 - -
Aip05g03582 1087 MobiDBLite consensus disorder prediction 710 777 - -
Aip05g03582 1087 PANTHER NB-ARC DOMAIN PROTEIN 13 539 - -
Aip05g03582 1087 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 944 1078 IPR044974 GO:0006952
Aip05g03582 1087 SUPERFAMILY L domain-like 127 475 - -
Aip05g03582 1087 SUPERFAMILY "Winged helix" DNA-binding domain 15 117 IPR036390 -
Aip05g03582 1087 Pfam TIR domain 940 1069 IPR000157 GO:0007165
Aip05g03582 1087 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 539 IPR044974 GO:0006952
Aip05g03582 1087 PANTHER NB-ARC DOMAIN PROTEIN 944 1078 - -
Aip05g03582 1087 ProSiteProfiles TIR domain profile. 938 1087 IPR000157 GO:0007165
Aip05g03582 1087 SMART till_3 939 1072 IPR000157 GO:0007165
Aip05g03582 1087 Gene3D Ribonuclease Inhibitor 97 301 IPR032675 -
Aip05g03582 1087 Gene3D - 933 1086 IPR035897 -
Aip05g03582 1087 SUPERFAMILY Toll/Interleukin receptor TIR domain 929 1074 IPR035897 -
Aip05g03582 1087 Gene3D Ribonuclease Inhibitor 302 483 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03582 Aip-Chr5 143334855 143342605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03582 21 369 WRKY Transcription Factor Family AT4G12020 35.342 5.41e-44 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03582 - - ahf:112801816 1721.06