Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03580 ATGGGAGATCCTCGTTTATCACTGGTACTATCCTCCCACTCCTCATCCTCAGACTACGGATGGGACTACGACGTGTTCCTCAGCTTCCGAGGTCCAGACACCGGCAAGCACTTCGCCGGAAATCTCTATTACGCTCTCAAACAGAGGGGAATCCGGACGTTCTATGCTGACAGAGAGCTTGAGAGAGGAGAGGAGCTCGCGCCAACGCTCCTGAAGAGAATTCAAGATTCGAAAACCGCCATCCCTGTGTTCTCTCCAGGTTATGCTGATTCTGCATTCTGCTTGCTTGAACTTGCAGCCATCATGGATAACAGCAAGGCGAAGGGACGGTTGGTTTTTCCGGTGTTCTACGGTGTAAGTGCTTCTGATGTTCGAGGTCAGACTGGAGATTACGAAAAGGCAATGGCTAAGCATCAAAGTAGGAATGACCACCACGTCGTGCAGAAATGGAGAGAAGCTCTTCAGCAAGCAGCTAACTTGTCCGGCAGCAGTTTCAAATTTCAGAACGAATATGAATTTGAGTTCATTGAAAAGATCATTGAAGTGGTCTCCAAAAATGTCAATCGCACTCTTCTCTGCGTTGCAAAGCATCCAGTTGGATTGGAGTCTCCGGTGCAAGAAGTATGCAAGCTTTTGGATGTAGGACCTGGATGCAATAATAACCAAGTCTGCATGGTAGGAATTCATGGAATTGGGGGAATAGGTAAATCAACTCTCGCTAAAGCAGTTTTTAATTATATAGCTGACCAATTTGACAGTTCATGCTTTCTTGAAAACGTGAGAGAAAATTCAAGTAAGCATGGATTGGAACATCTACAAGCGAAGCTTCTTTTTGACATTGTTGGAGAAAAGAATATTAGTTTGATAGGCCCCAGTGAAGGTGTTCCACTAATAAAGCATAGGCTACACCAAAAGAAGGTTCTTTTGATTCTTGATGACGTTGATGAAGAAAAGCAGTTGAAAGAACTTGCTGGAGGGCTAGATTGGTTTGGTTCTGGTAGCAGAGTCATAGTTACAACGCAAGACCAACAAGTACTAAGACTTCATGGGATTGAAACAAAATATGAGTTAAATGGGTTAAAATTTGAAGATGCTCGTAAATTGTTTGAATTGAAACTGAAGAAGAAAGCTGATCCACATTTCGATGATGTTATAAATCGTGCAGTGACTTATTGTGCAAAGCATCCATTGGCTTTGGAATTAATAAGTTCTGATTTGGGTAGTATAAATGCAGATGAATGGGAATCTGCATTAGGCCATTATGAAAGAAATCTTGGCAAAGAAATCTATGATAAACTTAAAAGAAGCTTTGATCGTTTGGAGAAAGAAGTGCAAAGTGTGTTTCTTGACATTGCTTGTTGCTTTAAAGGACTCAGTAGGACAGAGGTCAACAATATGCTTCGTGCACATCATGGTTTCTGCCCAATATATGCTATTCGACTTTTGGAGGAGAAATCTCTCATAATGATTGAAGACAATGAGGTGAGATTACATGACAAGATACATGAAATGGGTAGGAAAATTGAACAAGAAGGAAAGCATGGACACCGCTATCTCTTGTCGTCCTATGAAGCTATAGTTCAATTTTTTAAACACAAGGGCATTCATGATAAAATTGAAATGATAGTTCTAGACCTTTCCAGCTCAAAAGAACAAGTGGTGGAATGGGATGGAGAAGGCTTCAAAGATATGAAAAGTCTCAAAACTCTTATAAATCGAAATGTCTATTTTTCGCAAGATCCCAATCACCTTCCCAATAGTTTGAGAGTATTTGAATGGCCAGGATATTCTTCACGTTCTTTACCAGCTAATTTTTGTCCAAAGGAACTTGTCCTGTTCAAGTTACCCAGTAATCGCTTAATGTCACTCAATTTTCTCAAGGAGTTTGTGAACATGAGAGTTTTGAATTTTGATGATGCTGAATGTGTAAAAGCTATACCTAGTCTATCTTCTACCCCAAATCTGGAAGAACTATCATTCTCAAACTGTGAGAGTTTGACTGAAATTGATGAATCGGTTGGAAATCTGAGGAAGCTTAAGATATTAAATGCCTTTGGTTGCAGCAAGCTTAGGAGCTTCCCACCCCTTAAGTTACCATCTATTGAAGAACTCAACTTCACCAGCTGCTCAAATCTTGAGAATTTTCCAAAAATCTTAGAAAAGATGGAGAATTTAACAAAGCTTGAGTTAGATTGCACTGCCATAAAAGCTATACCTGATCTATTTTCTGCAGAGAATTTAGTAGAATTATCATTTTCATACTGTGTGAATTTGATTGAAATTGACGAGTCAGTTGGGTTTTTGATTAAACTTAGATTACTTAATGCCTTTGGTTGTTGTAAGCTCAGAAGCTTTCCATCCCTTTTGTTGCCATCTCTTGAAGAACTTGATCTCTCATGGTGTTCAAGCCTTGAGAATTTTCCAGAGATATTAGACAAGATGGAAAAGATAACACGGCTAAGATTGCAGTATACTCCCATAAAAGAATTGCCAAATTCCATCCAAAATCTTACTCGGCTTCGAGACTTGGAAATGTTTGAATGTGGAATGCTTCAGTTACCGAGCAACATTACCTTATTGCCGGAACTGAGACACATCTTGTTTTGTCGAACACCTAACCAAGATGAAGGTGAAGAAAAATTGAGTTGGATTGAGTCTTCAAACAGCACACTTCATGCATCTCAGTGTACTATATCAGATGAAATATTTCCAAACTTATTTGGTTGGTTTTCTATGTATATGGAAGAATTAGACTTGTTCCGTGTTAATTTCACATTCCTTCCTGATTGCATCATGGAGTGTCCTCTTTTGAAGGAATTGAATTTGGATCAGTGTCATAATCTTCAGAGGATTAGATGGCTTCCACCCAACTTGGAAACACTTTCCGTGACATGTTGTAGATCTTTAGAAGATTTAGACCTCACAATTCTTCCTGGAAGTACCAAAGAATACTACAATTTCAGGAGACTCATTGTAGATAATTGTGAAAATCTTCAGATAATCAAAGGAATTCCACCAGAAGGGTCAGGGAATTGCATTCCAGAGTGGTTCCATCCCTGTAAAAATGGAAATTCATCAGTCTCTTTCTGGTTTCGAAATAAGTTTCCTGCCATTTCACTTTGTGTTTTCCTTGGAGCATTGGGTAAACACCAAATAGCATTCTATTTTTGCCCCAAATTGGAGATCAATGGCAATACTGTAAATAAGTGGCTTCTAGAGAACAAGAAGTATTGGTTTGTGCAAGAGGCAGAAGCTGATCATATATTCATTCTCCATGAAAAACAAATGAATAATGAAAACAGTGTGAATGAAGCACTTGTGAGAAATAAAGAATGGAATCATGCCAAGATTTTTGTTGATGTCTATTCTCCAAGGGGATGGACAGAAATTGACATGCAAATTGGAATTCATGTATTCAAAGGAAAAAATAGCATGAAGGATGTCCAATTCACCAATCCTTATAATAATGTTACTGGGGAATCTAATTCAGTGGATTCAACACAGCAAAGTGGAACTAGCATAGTGAAAGTGAATTTGGCGCGCATTTCTAATAATTATTCCCGAACATTCTAA 3573 0.3882 MGDPRLSLVLSSHSSSSDYGWDYDVFLSFRGPDTGKHFAGNLYYALKQRGIRTFYADRELERGEELAPTLLKRIQDSKTAIPVFSPGYADSAFCLLELAAIMDNSKAKGRLVFPVFYGVSASDVRGQTGDYEKAMAKHQSRNDHHVVQKWREALQQAANLSGSSFKFQNEYEFEFIEKIIEVVSKNVNRTLLCVAKHPVGLESPVQEVCKLLDVGPGCNNNQVCMVGIHGIGGIGKSTLAKAVFNYIADQFDSSCFLENVRENSSKHGLEHLQAKLLFDIVGEKNISLIGPSEGVPLIKHRLHQKKVLLILDDVDEEKQLKELAGGLDWFGSGSRVIVTTQDQQVLRLHGIETKYELNGLKFEDARKLFELKLKKKADPHFDDVINRAVTYCAKHPLALELISSDLGSINADEWESALGHYERNLGKEIYDKLKRSFDRLEKEVQSVFLDIACCFKGLSRTEVNNMLRAHHGFCPIYAIRLLEEKSLIMIEDNEVRLHDKIHEMGRKIEQEGKHGHRYLLSSYEAIVQFFKHKGIHDKIEMIVLDLSSSKEQVVEWDGEGFKDMKSLKTLINRNVYFSQDPNHLPNSLRVFEWPGYSSRSLPANFCPKELVLFKLPSNRLMSLNFLKEFVNMRVLNFDDAECVKAIPSLSSTPNLEELSFSNCESLTEIDESVGNLRKLKILNAFGCSKLRSFPPLKLPSIEELNFTSCSNLENFPKILEKMENLTKLELDCTAIKAIPDLFSAENLVELSFSYCVNLIEIDESVGFLIKLRLLNAFGCCKLRSFPSLLLPSLEELDLSWCSSLENFPEILDKMEKITRLRLQYTPIKELPNSIQNLTRLRDLEMFECGMLQLPSNITLLPELRHILFCRTPNQDEGEEKLSWIESSNSTLHASQCTISDEIFPNLFGWFSMYMEELDLFRVNFTFLPDCIMECPLLKELNLDQCHNLQRIRWLPPNLETLSVTCCRSLEDLDLTILPGSTKEYYNFRRLIVDNCENLQIIKGIPPEGSGNCIPEWFHPCKNGNSSVSFWFRNKFPAISLCVFLGALGKHQIAFYFCPKLEINGNTVNKWLLENKKYWFVQEAEADHIFILHEKQMNNENSVNEALVRNKEWNHAKIFVDVYSPRGWTEIDMQIGIHVFKGKNSMKDVQFTNPYNNVTGESNSVDSTQQSGTSIVKVNLARISNNYSRTF 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03580 1190 PRINTS Disease resistance protein signature 788 804 - -
Aip05g03580 1190 PRINTS Disease resistance protein signature 225 240 - -
Aip05g03580 1190 PRINTS Disease resistance protein signature 392 406 - -
Aip05g03580 1190 PRINTS Disease resistance protein signature 301 315 - -
Aip05g03580 1190 SMART till_3 22 160 IPR000157 GO:0007165
Aip05g03580 1190 PANTHER ARCHAEAL ATPASE 33 733 - -
Aip05g03580 1190 Gene3D - 185 352 IPR027417 -
Aip05g03580 1190 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 733 IPR044974 GO:0006952
Aip05g03580 1190 Gene3D Ribonuclease Inhibitor 886 1065 IPR032675 -
Aip05g03580 1190 Gene3D Ribonuclease Inhibitor 720 885 IPR032675 -
Aip05g03580 1190 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Aip05g03580 1190 PANTHER ARCHAEAL ATPASE 734 1117 - -
Aip05g03580 1190 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 162 IPR035897 -
Aip05g03580 1190 Pfam TIR domain 23 189 IPR000157 GO:0007165
Aip05g03580 1190 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 734 1117 IPR044974 GO:0006952
Aip05g03580 1190 SUPERFAMILY L domain-like 830 975 - -
Aip05g03580 1190 SMART LRR_CC_2 790 840 IPR006553 -
Aip05g03580 1190 SMART LRR_CC_2 955 980 IPR006553 -
Aip05g03580 1190 SMART LRR_CC_2 652 679 IPR006553 -
Aip05g03580 1190 SMART LRR_CC_2 698 728 IPR006553 -
Aip05g03580 1190 SUPERFAMILY L domain-like 561 873 - -
Aip05g03580 1190 Pfam NB-ARC domain 219 427 IPR002182 GO:0043531
Aip05g03580 1190 Gene3D Ribonuclease Inhibitor 490 719 IPR032675 -
Aip05g03580 1190 Gene3D - 19 184 IPR035897 -
Aip05g03580 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 451 IPR027417 -
Aip05g03580 1190 Gene3D - 359 449 IPR042197 -
Aip05g03580 1190 SUPERFAMILY "Winged helix" DNA-binding domain 428 511 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03580 Aip-Chr5 143317049 143322682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03580 199 837 WRKY Transcription Factor Family AT5G45050 30.448 2.99e-66 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03580 - - ahf:112751548 2352.78