Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03579 atggaaaagcatgaagaaaggcatggcaaagagacagtaagtaagtggaggattgcattgaaagaagcagccaatttgtcaggatggagtttcaaaaatggGTATGAGTATAAGTTTATTCAAGAGATTACTGAGAAAATATCAAGCATACTAAACATTACCTCCTTACACATTGCTGATCACCCAGTTGGATTAAACTATAGAGTGTCAAAAGTGTTGAGGCTCCTAGCACCAAATTCTAATGATATCAAAATGGTTGGAATCTATGGTATTGGTGGAATTGGCAAAACAACCATTGCTAGAGCTGTGTACAACTCAATTTCTAGCAGGTTTGAAGGGTCAAGCTTTCTTGCTGATGTGAGAGAAAATACAGTGAAACATGGTTTGGTCCAACTACAAGAGACTCTTCTCCATAATTTTCTTGGAGAAAACATCAAGTTGGGTGATGTGAACAGAGGAATTCCCATAATAAAGAGAAGGCTttgcaccaagaaggttcttctgattcttgatgacgtcgacaacctgcgacaactgaggtcattggctggcagccatgattggtttggttccggaagtaggatcatcataacaacaagggacaaacatttgctaactgctcatggggttgaaaatggaaacatatatgaaatgaaacagttgaatgatcatgaatctcttgagctatttagtttaaatgcttttagaagaaagcaaccaaaggaaaattatgtcaacattgcgaaccgcatggttcaatatgccaaaggccttccactggctttgaatgtgattggttctgatctgtttggcaaaacaattgaagaatgggaaagtgcattgaagaaatatgaaagaattccaagcagagagatcttagatgtgctcagagtaagctatgataatttggatgataatgagaaggaaattttccttgacattgcatgtttcttcaagggaaactttagacaggatgtggaaaagacactagtggcctcacgtttctttccagaatatggcattggagtacttattgacaaatctctagtaactattagtgatgccaacacaattaagatgcatgatcttatacaagaccttggaagagacattgctagaaaggattcgccattcgatccggggaaacgtagaagactatggCACTGTGATGATGTTCTTGAGGTCCTGACAAAAAACACAGGAACTGATGCAATTGAAGGCATAATGCTGGACATGACCAACCTAAAACAAAAGGTTCCATTAAATTCCAACACCTTTGAGAATATGAAAAGACTTAGGATTCTCATAGTTCGGAATGCACAagtttctggagcccccaatcatctgccaaataatttgagattgcttgattgggatgaatatcctttaccttctttgccagctgattttcatccagagacacttgttGTACTCAACTTGCCCCATAGTATTCTCACAATGGATGAGCCATTCAAGAAATTTGACCATTTGACATATATGAACTTCAGTGGTTGTGACTCTCTAACTACATTACCTGATGTGTCTGGAACACCAAATTTAACAAGAATTCTTGCTAATGATTGTCCAAACTTGGTTGAGATTCATGATTCTGTTGGACATCTCAACAAACTAGTCACACTGAGCACCGAACGATGTCCCAAACTCGAGGGATTTCCGAGTGGCCTGAGGTCAAAATCTCTTGAATACCTTAACCTTAGGGAATGTTCTAGCATTCAGAGTTTCCCAAATGTTTTGGAAAAAGTGGGAAGTATGAAAAATATTGATATAGGAGGGACTGCCATAAAAGACTTTCCAAACTCAGTTGAAAACTTTAGTAGTATTGAAGAGTTAATTTTGAGATCCTGCAAAAGTTTTGAGGTTCTACCTAGCAATCCTACCATGTTTCAAAATATTGAAGAGCTGAATGTGGAAGAATGTCCTCAACTTCCAAAACTCTTGTGGAAGTTATTAAAGGACAGAATTGATTCGCTCCCAAAGTTAAGTAGACTAACTCTCAAAAGTTGTGATCTATCAGATGAGGATCTTGAGTTAATTCTCAGCTGTTTTCTCCAATTGAAATGGTTGATCCTATCAAATAATAGCTTCACAACAATTCCTGATTGTATTGAAGATCTTTCAAGCCTCTTGCTGCTACATGTTGATAACTGCAATCAGCTTAGAGATATTTCAGTGCTTCCACCAGACTTACAATACATAAATGCAAGGAATTGCATGTCATTGACTTCGCGGTCATCAGATGTAATATTGAGTCAGGCATTTCATGAAGTTGAGTACTTAGACATTGTTGTGCTAAGGAGACAAATTCCAAAATGGTTTGACCATTGCTGCAAAGGAGGGTCTGCAGATTTCTGGGTTCGTAGAAAGTTCCCCAACATTGCTCTATTTTTTCTGTTAGGAGGCCAAGACGAACAGAGAACCGATCATATGTGCGAATTCCACTTGTTCATCAATGACCTCCTAGTATTTCAAGAAAAAAGAGGATGGCCAGTGGATCATGTATGGTTGTTTGATCTGCAAATTTACCTCACAGAAAGCGAACGACACAACATCAGGGAACAAATAAAGTCTGACTGGAATCATGTGAAGATTTCATGTTCAGTCATGAATGAGCCAAAAGATGTAATTGTTAAAGGCTGTGGAATCCATCTTTACAAGGAAAGAATGAACATCCATGATGTCTCCTTTATTAGTCCTGATCTACATGGCTCAAATAGTGCCTATGATAACATNGAATATAGCTGA 2763 0.2581 MEKHEERHGKETVSKWRIALKEAANLSGWSFKNGYEYKFIQEITEKISSILNITSLHIADHPVGLNYRVSKVLRLLAPNSNDIKMVGIYGIGGIGKTTIARAVYNSISSRFEGSSFLADVRENTVKHGLVQLQETLLHNFLGENIKLGDVNRGIPIIKRRLCTKKVLLILDDVDNLRQLRSLAGSHDWFGSGSRIIITTRDKHLLTAHGVENGNIYEMKQLNDHESLELFSLNAFRRKQPKENYVNIANRMVQYAKGLPLALNVIGSDLFGKTIEEWESALKKYERIPSREILDVLRVSYDNLDDNEKEIFLDIACFFKGNFRQDVEKTLVASRFFPEYGIGVLIDKSLVTISDANTIKMHDLIQDLGRDIARKDSPFDPGKRRRLWHCDDVLEVLTKNTGTDAIEGIMLDMTNLKQKVPLNSNTFENMKRLRILIVRNAQVSGAPNHLPNNLRLLDWDEYPLPSLPADFHPETLVVLNLPHSILTMDEPFKKFDHLTYMNFSGCDSLTTLPDVSGTPNLTRILANDCPNLVEIHDSVGHLNKLVTLSTERCPKLEGFPSGLRSKSLEYLNLRECSSIQSFPNVLEKVGSMKNIDIGGTAIKDFPNSVENFSSIEELILRSCKSFEVLPSNPTMFQNIEELNVEECPQLPKLLWKLLKDRIDSLPKLSRLTLKSCDLSDEDLELILSCFLQLKWLILSNNSFTTIPDCIEDLSSLLLLHVDNCNQLRDISVLPPDLQYINARNCMSLTSRSSDVILSQAFHEVEYLDIVVLRRQIPKWFDHCCKGGSADFWVRRKFPNIALFFLLGGQDEQRTDHMCEFHLFINDLLVFQEKRGWPVDHVWLFDLQIYLTESERHNIREQIKSDWNHVKISCSVMNEPKDVIVKGCGIHLYKERMNIHDVSFISPDLHGSNSAYDNXEYS 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03579 920 SUPERFAMILY L domain-like 421 753 - -
Aip05g03579 920 Gene3D Ribonuclease Inhibitor 659 783 IPR032675 -
Aip05g03579 920 Gene3D Ribonuclease Inhibitor 564 658 IPR032675 -
Aip05g03579 920 Gene3D Ribonuclease Inhibitor 405 563 IPR032675 -
Aip05g03579 920 Gene3D - 1 54 IPR035897 -
Aip05g03579 920 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 314 IPR027417 -
Aip05g03579 920 Gene3D - 55 211 IPR027417 -
Aip05g03579 920 Gene3D - 220 304 IPR042197 -
Aip05g03579 920 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 906 - -
Aip05g03579 920 SUPERFAMILY "Winged helix" DNA-binding domain 291 396 IPR036390 -
Aip05g03579 920 PRINTS Disease resistance protein signature 255 269 - -
Aip05g03579 920 PRINTS Disease resistance protein signature 710 726 - -
Aip05g03579 920 PRINTS Disease resistance protein signature 160 174 - -
Aip05g03579 920 PRINTS Disease resistance protein signature 85 100 - -
Aip05g03579 920 Pfam NB-ARC domain 67 286 IPR002182 GO:0043531
Aip05g03579 920 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 906 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03579 Aip-Chr5 143310220 143315993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03579 15 652 WRKY Transcription Factor Family AT4G12020 33.891 9.02e-94 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03579 - - lja:Lj2g3v0582820.1 1335.09