Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03575 ATGGAGACATGGAAAAACACCTCGAAGGTGAGGACTGAGAATGGCTTCCATAATTCAATGATTTTCGAGCTGCAAATTAAACTCCCATGGCTCCTCCTCAAGTTTCCCACGTCTTCCTCAACTTCAGAGGCGATGAAACTCGCTACGGTTTCACTGGCTATCTCCACAAAGCTTTTTGTGAAAAGGAAATCCACACCTTCATGGATCTCGAGGATCTTGTTAGTGGCAAGAAAATCCAGCAAACATTTGCTCGGGCATCGAGCAGCTAATTTTACTGGCTTTGTTTTCGAAGGGAATAAATATGAACACGAGTTTATTGGGAAGATCGTTGAAGTAGTGTCAAGGGAGATTAAATGTGTCTCTTTACATGCTGATTATCCAATTGGATTAGAGTCTCAGGTGTCAGAAGTAAAGTCGCTTTTATTCTCCGATGGCTATGATGGTGTCCACATGGTAGGGATTTATGGAAATGGTGGATCAGGCAAAACAACTATAGCTCATGCAATTTATCATTTGATTGCTAATGGTTTTGAAAGTATATGTTTTCTTGAAAATGTGAGAGAAAATTCATATAAGCATGGTTTAGTACATCTTCAAAACATACTTCTTTCCAACATTTTTGAAAGGAAGAATCTCAAATCAAGAAACATTGAACATGGAATTTCAACAATACAGCACTGGCTCCAACAAAAGAAGAAGACCCTTTTGATTCTAGATGATGTTGACAAGATAGAACAATTACAAGCTCTTGCTGGAAAACCTGATTGGTTTGGCCGTGGAACTAGAGTCATCGTTACAACCCGGGACAAACATTTACTAGAAAGCCATGGGATTGAAAGAATATATGTGATGGAGAATTCAAATTCGGAGTCAAATATCAGTGCATCAGCTGGAAAGGACAACAGAGAACAACTGGGTGAAAAAAGCACTTTCGGTGATCAAGTCAATGAGCCGCTCTTCGTGACGCAGCCAACTTATCCGGCTTGCATTACAAAGGCCTGGTTGAGCACAAGTGCTCTTATATTGTGCAGGGATGAATTTGAGTACGAATTTATTGAAAAGATCACTAAACAGGTGTTAGCAATTATTAAAGAGGACATGTTACCTGTTGTTGCTGATTACCCAacaggtagttatggggaagcaatggctaaacacgaggaaaagttcaaggatgacaaatcaaaagtcgaaaaatggaagcgtgctttgcatgaagcagctaactttactggctTTTGTTTCAAAGGAAAAAAATATGAACATGAGTTTATTGCAAAGATTGTTGGAGTGGTGTCAAAGGAGATTAAACGTGTTGCTTTACCTGTTGCTGACTATCCAATTGGACTAGAGTCTCAAGTGTCGAAAGTAAAATCGCTTATATTCTCTGATGGCTATGATGGTGTCCACATGATAGGGATTCATGGAAATGGTGGATCAGGAAAAACAACAATAGCTCATGCAATTTATCATTTGATTGCTAATGGTTTTGAAAGTATATGTTTTCTGGAAAATGTGAGAGAAAATTCATATAAGCATGGTTTAGTACATCTTCAAGATATACTTCTTTCCAACATATTCGAAAGGAAGAATCTCAAATCAACAAGCGTTGAACAAGGAATTTCAAATATACAGCACTGGCTCCAACAAAAGAAGATCCTTTTGATTCTAGATGATGTTGACAAGATAGAGCAGTTACAAGCTCTTGCTGGAAAACCTGATTGGTTCGGCCGTGGAACTAGAGTCATCATTACGACACGAGACAAAGATTTGCTAGTATGCCATGGCATTCAAAGAATATATCAGCTGGAGAATTCAAATCCGGAGTCAAATATCACTGCATCTGCAAGAAAAGACAACACAGAACAAGTGGTTGAAAAAATCACTAGTGGACAAGTCAATGGTTCATTAGAGCCTCCATTTTCAGAAGATACTAATGTTGATAGAAGCAAACAAGTGTCGGTTATTCAAGCTCAATCAAATGCACAAGTCATATGTCAGTTTAATGAAAACCAAGCAGAGTTTTGTCATACACGTTCTCTAGAAAGAATAGAAAGTGCCAACACTTTGAAAGTGAAGGAGGAACTTGAAGTTGTAGACTTGTCTTTGTGTGCTAAGTTGGCATCTTTGGAGGAAAAGAAAAGAGAACTTGAAGAGCAAATTCGTGCAGTAAAAGCTGAAATTTCAGATTTCATTTTACAGCAGAGAGACAGTTGCTAA 2220 0.3635 METWKNTSKVRTENGFHNSMIFELQIKLPWLLLKFPTSSSTSEAMKLATVSLAISTKLFVKRKSTPSWISRILLVARKSSKHLLGHRAANFTGFVFEGNKYEHEFIGKIVEVVSREIKCVSLHADYPIGLESQVSEVKSLLFSDGYDGVHMVGIYGNGGSGKTTIAHAIYHLIANGFESICFLENVRENSYKHGLVHLQNILLSNIFERKNLKSRNIEHGISTIQHWLQQKKKTLLILDDVDKIEQLQALAGKPDWFGRGTRVIVTTRDKHLLESHGIERIYVMENSNSESNISASAGKDNREQLGEKSTFGDQVNEPLFVTQPTYPACITKAWLSTSALILCRDEFEYEFIEKITKQVLAIIKEDMLPVVADYPTGSYGEAMAKHEEKFKDDKSKVEKWKRALHEAANFTGFCFKGKKYEHEFIAKIVGVVSKEIKRVALPVADYPIGLESQVSKVKSLIFSDGYDGVHMIGIHGNGGSGKTTIAHAIYHLIANGFESICFLENVRENSYKHGLVHLQDILLSNIFERKNLKSTSVEQGISNIQHWLQQKKILLILDDVDKIEQLQALAGKPDWFGRGTRVIITTRDKDLLVCHGIQRIYQLENSNPESNITASARKDNTEQVVEKITSGQVNGSLEPPFSEDTNVDRSKQVSVIQAQSNAQVICQFNENQAEFCHTRSLERIESANTLKVKEELEVVDLSLCAKLASLEEKKRELEEQIRAVKAEISDFILQQRDSC 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03575 739 Coils Coil 383 403 - -
Aip05g03575 739 SMART AAA_5 468 609 IPR003593 -
Aip05g03575 739 SMART AAA_5 148 288 IPR003593 -
Aip05g03575 739 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 441 609 IPR027417 -
Aip05g03575 739 PRINTS Disease resistance protein signature 691 707 - -
Aip05g03575 739 PRINTS Disease resistance protein signature 151 166 - -
Aip05g03575 739 PRINTS Disease resistance protein signature 228 242 - -
Aip05g03575 739 PANTHER ARCHAEAL ATPASE 376 610 - -
Aip05g03575 739 PANTHER ARCHAEAL ATPASE 86 291 - -
Aip05g03575 739 Pfam NB-ARC domain 131 279 IPR002182 GO:0043531
Aip05g03575 739 Pfam NB-ARC domain 451 591 IPR002182 GO:0043531
Aip05g03575 739 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 288 IPR027417 -
Aip05g03575 739 Gene3D - 335 433 IPR035897 -
Aip05g03575 739 Coils Coil 700 734 - -
Aip05g03575 739 CDD AAA 128 267 - -
Aip05g03575 739 CDD AAA 448 586 - -
Aip05g03575 739 Gene3D - 434 598 IPR027417 -
Aip05g03575 739 Gene3D - 115 280 IPR027417 -
Aip05g03575 739 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 376 610 IPR044974 GO:0006952
Aip05g03575 739 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 86 291 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03575 Aip-Chr5 143261174 143267168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03575 386 604 WRKY Transcription Factor Family AT4G12020 31.250 5.48e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03575 - - aip:107641418 721.85