Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03572 atgatattagatggttgtgacctacattcggataatggtttcggagttctattggagaagtctctaattacaatagaagttaataagatttggatgcatgatttgctacaggaaatggctaaagaaattgtgcgacgtgaatcccctagtgatcctggtaaacgtagcagattatggTTTAATGAGGATGTTCTTCATGTATTAAAACACAATAAGGGAAGTAACAACATTGAAGGCATAAGGCTAGATATACCAGAATCAGAGACAGAGTACATAGAGGCCAAGGCCTTGTCAAGGATGAATAGACTCAGAATTCTTATTATCAACAATATGCATGTTACAGATGATATCCAGTATCTACCTGATAATCTAAGATTGATTAATTGGCCAAGATACCCCTCTTCAACTCTACCACCAAATTTCTATCCAAGGAGGCTTGTCTGTCTAAATATGAGTCATAGCCGCCTCAAGCACTTGTGGAAGGGAGTTAAGATATTCAGAGACTTGAAACTTGTGTCCTTTAGCAGCTGTGAACACCTTAAAGAAATTCCAGACTTCTCAATGGTTCCAAACCTAGAAAGCCTAAGCCTAGACAACTGTAGAAGTTTAATTAAGGTGCATGAGTCTGTGGGAACTCTTGATAAGCTTGTTACTTTAAACCTTCTATTTTGCTCCAATCTCAAGACGTTTCCAAGTCGTTTCATGCTAAAATCACTCCGTACTCTCCTCCTCACTGGCTGCTCAAAACTAAAAAAGTTTCCGGAGATTGTGGGGAACATGGAACATCTTGAAGAAATCCTTCTCCAAGGAACAGCAATAAAAGAACTACCTCAGTCGATTGAATATCTAAGTGGGCTGAAGTCCTTATTCTTAGAGTCTTGCCAAAGTCTTGAGCATCTCCCCAGTAGCCTTCAGAAGTTGCAAAACCTTACCATTCTTGATCTAAGTGGCTGCTCTAAGCTTCAAAAGATTCCAAAGCTTCCCCTAAATACAAGATATATAGACTTGAGTAATTGTAGATCTTTGACAAGCTTTCCAACATTATCCAGCATATCAAATTTTATTGCAGAGGATTTTCCAAGGTTTTATCAAATTAGATTTGTTAACTGCCATAAACTGGTAAATAAACAAGTCCTGGAGCACATAACAAATCTCTTCTGTAGTAAGGATATGATGCTTCCAGAATATATTTCTTGTGAAGTTGTACTTCCAGGGAGCAAGATCCCAGATTGGTTCCAATACCAGAGTACTAATAATTCCATTTATCTTGAGGTATCTTCAGGTTTATATGGTAAGCCCATGGAGGTGTTTTTTGGCGCAGTTTTTGAGTTGGATAAAGGTGTTACTACAACTGGCCTGTTTGCAAGTAAATTTGATGTTATTGTCAATGATATAAAGATAAATATGTCTACAAGCTATTTTGAGGCACTGGACTCAAGTCATGTGTGGTTGAGTCGGTTGAAACTTGATCATTTTATGTGGCACCTTAAAAGTATGCGTCAATGGAATCACTTTCAGATTTCATTTTCAATCTTTGAAACATCATCAAAGGAGAAGATAGGGGCAACCTTGAAGAGTTGTGGTTTCCATGTTTGGTACAATCAAGAAGGGTATGGGATTGATCATACAACAGTTAGGAAGTCCACAGGGTAA 1653 0.3394 MILDGCDLHSDNGFGVLLEKSLITIEVNKIWMHDLLQEMAKEIVRRESPSDPGKRSRLWFNEDVLHVLKHNKGSNNIEGIRLDIPESETEYIEAKALSRMNRLRILIINNMHVTDDIQYLPDNLRLINWPRYPSSTLPPNFYPRRLVCLNMSHSRLKHLWKGVKIFRDLKLVSFSSCEHLKEIPDFSMVPNLESLSLDNCRSLIKVHESVGTLDKLVTLNLLFCSNLKTFPSRFMLKSLRTLLLTGCSKLKKFPEIVGNMEHLEEILLQGTAIKELPQSIEYLSGLKSLFLESCQSLEHLPSSLQKLQNLTILDLSGCSKLQKIPKLPLNTRYIDLSNCRSLTSFPTLSSISNFIAEDFPRFYQIRFVNCHKLVNKQVLEHITNLFCSKDMMLPEYISCEVVLPGSKIPDWFQYQSTNNSIYLEVSSGLYGKPMEVFFGAVFELDKGVTTTGLFASKFDVIVNDIKINMSTSYFEALDSSHVWLSRLKLDHFMWHLKSMRQWNHFQISFSIFETSSKEKIGATLKSCGFHVWYNQEGYGIDHTTVRKSTG 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03572 550 Gene3D Ribonuclease Inhibitor 71 234 IPR032675 -
Aip05g03572 550 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 2 275 - -
Aip05g03572 550 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 275 IPR044974 GO:0006952
Aip05g03572 550 SUPERFAMILY L domain-like 45 353 - -
Aip05g03572 550 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 276 526 - -
Aip05g03572 550 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 276 526 IPR044974 GO:0006952
Aip05g03572 550 Gene3D Ribonuclease Inhibitor 235 389 IPR032675 -
Aip05g03572 550 Pfam C-JID domain 403 536 IPR045344 -
Aip05g03572 550 SUPERFAMILY "Winged helix" DNA-binding domain 12 69 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03572 Aip-Chr5 143170023 143172599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03572 1 358 WRKY Transcription Factor Family AT4G12020 38.889 4.22e-58 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03572 - - ahf:112749316 772.311