Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03544 ATGCTCAGGAGTCAGGACCCTCAACATGTACAAAGTAGTCTCGAAAAACTGGCCGTAGATCGAATCCATTTTCTCCTTCGAATCAACCGCCAACGTCCGTACGCAGGCGGTTACTTCCTTGGCGTGAAGCTTGGCGACGATGTGAGGACAATGCTATCGGACTTCGAATCGGCGATTCAGAAGGAACCGTGCAAGACAACGGCTCCCGGCGGTGGAGTACACCTGATCACGCGCTACGTGTTGAACTACATCTCTCTCTTAGCCGATTACAGTAGTGTCCTCATTGACATAATCGCCGATTATCCATTGTCTCCGTTTCCAGAATATTTCTACCGAAGCCTAATCCACGAGGATAGCACGTCATTGTCCTTGATGTTCAGGAGTCTTGGGTGGATGGCAAAACATGAAGCGAAGACGAAGGAATACGTAGTCAAATACGAGCGCATTGGGTGGAACAGTGTGCTCACTTCGTTGCCGGAGGCGCGGCGGAGATCACAGTAG 501 0.507 MLRSQDPQHVQSSLEKLAVDRIHFLLRINRQRPYAGGYFLGVKLGDDVRTMLSDFESAIQKEPCKTTAPGGGVHLITRYVLNYISLLADYSSVLIDIIADYPLSPFPEYFYRSLIHEDSTSLSLMFRSLGWMAKHEAKTKEYVVKYERIGWNSVLTSLPEARRRSQ 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03544 166 SUPERFAMILY Cullin repeat-like 43 161 IPR016159 -
Aip05g03544 166 Gene3D Exocyst complex component Exo70 39 129 - -
Aip05g03544 166 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 130 159 - -
Aip05g03544 166 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 42 111 - -
Aip05g03544 166 PANTHER EXOCYST COMPLEX PROTEIN EXO70 42 111 IPR004140 GO:0000145|GO:0006887
Aip05g03544 166 Pfam Exo70 exocyst complex subunit 43 103 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip05g03544 166 PANTHER EXOCYST COMPLEX PROTEIN EXO70 130 159 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03544 Aip-Chr5 142809728 142813337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03544 43 159 EXO70 exocyst subunit family AT1G07725 31.361 7.21e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03544 K07195 - ahf:112747255 261.536