Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03534 atgggcaaagaaattgcactagaagaatcaccagaaatgcctgaaaagcgtagtaggttatggTTCTATGAAGATATAGTTAAAGTTTTACAAGATAATCTAGGTACTAGCACCATTGAAATCATATATTTGGAATTTCCCTTATTGGAAAGGAAAGGAGATGAAGATTCATTTGAAAAAGAGGGAAATAAAGATGTTGAAGTAAAATGGGACGGAACAGCTTTTAAAGAGATGAAAAATCTCAAAACGCTTATCATAAAAAATGGTTGTTTTTCTGAATGTCCCAAATATCTTCCAAACAGTTTAAGGGTATTGGAATGGTGGAGATTTCCTTCAGAGTGGCTACCAAATGATTTTCAACCAAAGAAACTCTCCATACTCAAGTTATCGAATAATCTCTATTTGGCACACAAGTTGGATAGCTTAGCCAAGAAGCTGGTGAGTTTGAAAGTTTTGAATTTTGATTACAATGATTCTTTGAAAGAAATAGCTGATGTGTCTAGTCTTCAAACTTTAGAAGAATTTTCGTTCCGAGGATGCAAAAACTTAGTTACAGTTCACAGTTCAGTTGGGTTTCTATCTAAACTTAAAAGATTGAATGCTGAATATTGCGAGAAGCTCAGGACTTTCCCAGCAGCTATCAAATTGCCCTTACTGAAAGATTTCAGTCTATGTGGTTGCTCAAGCCTGGTCAATTTTCCAGAAATTTTAGAAGAGATGGCAAATGTAGGATGGCTTGATTTGAAAGGCACTGGCATAAAAGATTTGCCATGCTCATTTCATAATCTTTCTGGATTGCGAAATCTGGAAATTATTTGGAATGAAATGTGTAAGATACCAAGCATCATTTTTATGATGCCACAACTATCTTCATGTTATATTGAGGGAGGAGGCAAGAAGAGGAAGGTATCATCGGAAAAGCCGGAGGAGGATGAGGAGGAGGGGCTTCAAGGAATACTCACTCACTCCCTCCCCTCGCAACATATGATGAAAGCTCTTTGTCTCAGAGACACCAATCTGTCAGATGATTTTTTTCCACTAGCTGTTGCATGGCTTCCAAATGTGACACAATTAAGCCTAAGAGGCAATAATTTCACAGTCCTTCCTGAATGCATGAAAGAATTTTGCTTTTTATACTTGCTCATCGTCGATGATTGCAACCATCTTCAGGAGATTAGAGGGATTCCACCTTGCTTGACAAACTTCTCAGCAGTAAACTGCAAATCCTTGAGTCCTAGAGCCACAAGAGTTTTACTCAATCAGGAATTACATGAGGGTAGATGGACAATCTTTGCAATGCCAGGTGGAAGGATTCCAAGGTGGTTTGAGAAGCGCTGCAGCGGAGCTTCAATTTCATTCTGGTTTCATGGCACTGAATTCCCTGACAATGCTCTTTTCTTTGCAATTCTACTCAAAGATGGCCTCCCTTCCCCAGTTGAAGTATTACCCATCGTCACTGTCAATGGCAACCAGGTTTCCTGTCGATGGCGGGAGACCCCAGTGGATCAATTATTTATTTTTCATCTGTCAGAGACAATTGCTTATAATGTAATACTACGTTTTGAAAACAAATGGAATCATGCAGAGATTTCATATGAAGCACATGACTACTATACCTATGATGAGGTCCCCACTGAGTCAATTGCAAAAGAGATTGGAATCCATCTATTGAAGCAAAAGATCAGTAGCAGTATAATTCAAGATATCCGATTCACTGATCCTTACAAAATGACACAACTAATCATAATGATGATGATGATCTCAATAGTATTGCCCAACCATAAGAAGCAGCCCTTACTCCTTGAAACATCCATTGgctATCATTTCAAAGATGGGCATGGATATGAGCATCAGTTTATTAAAAAGATCGTGCAAGACATTTCAAGAAAGATTGGGCGTCTACCTTTGCCAGTGGCTGACTTCCCTGTTGGACTCGAGTCTCCAGTGtcagaaGGAACTAGTGCCATTGAAATCATACATTTGGAATTTCCTTTATTTAGAAAGGAAGGAGGTGAAGATCCGTCAAAAAAAGAGAAAAATGATGATGTAGAAGTAAAATGGGATGGAACAGCTTTTAAAGAGATGAAAAATCTCAAAACACTTATCATAAAAAATGGTCGTTTTTCCAGAGGGCCCAAATACCTTCCAAATAGTTTAAGAGTATTGGAATGGAGGAGATATCCATCGAGATATTTTCCCTCTAATTTTGATCCAGAAAAGCTTTCCATACTCAAGTTGCCTGATTATCTCTACATGTCACCCAAGTTGGATAGCATATCCAAGATGTTGATCACCTTGAAAGTTTTGAGTTTTGATTACAGTGATTCTTTGAAAGAGATACCTGATGTGTCTAATATTCAAACTTTAGAAGAATTTTCTTTTGAAGGATGTAGTAATTTAGTCTCAGTTCACAGTTCAGTTGGTTTTTTACCTAAACTTAGAATATTGAATGCTGAAAAGTGTCCCAAGCTCAGAAGTTTTCCACCTGTTATTAATTTGCCCTCACTGGAAATGCTCGGTCTATCTGGATGCTCAAGCCTTGAGAAATTTCCAGAAATTCCAGAAGAGATGAAAAATCTAGAAGAGCTTGATTTGATTGGCACTGGGATACAAGATTTGCCATGTTCATTTTGTAACCTTTCTAGATTGTGGCATTTGTATTTGGAGGAGAATAAAATGCATAAAATACCAAGTGTCATTTGCATGATGCCAAGCCTGGATTTTTGTAATATTAACTTAGGAGGAAACAAGGGGAGGGTATCGGGAGAGCAGGAAGAGGGGCTTCACGGAATATTCACTCACTCTCTCCCCTCTTCAGATATGGAACACCTTTCTCTCAAGAACAGCAATTTGTCAGATGAGTTTTTTCCACTAGCTGTTGCATGGTTTCCCAATGTGGAATTTTTAGACCTAACAGGCAATAATTTCACGGTCTTTCCTGAATGCATCCAACAATTTCGCTTTCTAAAGATACTCAAGGTGGATGATTGCGAGCATCTTCGGGAGATTAGAGGGATTCCACCGTGCTTGACAGACTTCTCAGCAGTAAACTGTAAATCATTGAGTCCGAGGGGCACAAGCGTGTTACTCAACCAGCAAGTGCACGAGGGTAGAAGCACCCACTTTGTGATGCCAGGTGGAAGCATTCCAAGGGGGTTTGAGTGGCGCAGCAGTGGAGCTTCTATTTCTTTCTGGTTTCGTGGCACCATATTCCCTTACAAATCTCTTTGCGTTGCAATTCTACTCAAACATGACATCCTTTCCCCACCACTTCAAGTAAAACCCACTGTGACCATCAATGGCAACCAAGTTCAATTTGGACGGTATGGCCTTATGGGTCAATTATTTATTTTTAATCTGAAGAGAGATGATTATTATTATGAAGCACCACATTTTAAAAGAGGATGGAATCATGTGAAGCTTTCATATGAAGCATATTATAAGGGTTTTGAGGGAAAGGTGCCGAGTGAGTCAATTGGAAAAGAGATTGGAATGCACGTATGGAAGGAAGAGAGTAGTAGTATAATGGAAGATATTCGATTCACTGATCCATACAAAATGACACAACTAATTATAATGATGATCATGCTCTCAATAGCATTCCCCAACCATAAGAACCACCCCTTGCTCCTCCAAACATGCATTGGTTATTGGACCTTGCTCTTTCTAACTATGTATGATTTGGATAATGACAGTGAATTAGGGTCGGAAGGATCAAATATCAGCGACGGTTCAATGGCATCCACAGAGCTAGCGGGTGCAGAACTTGGGTGTGCCCAAATGTAA 3786 0.3843 MGKEIALEESPEMPEKRSRLWFYEDIVKVLQDNLGTSTIEIIYLEFPLLERKGDEDSFEKEGNKDVEVKWDGTAFKEMKNLKTLIIKNGCFSECPKYLPNSLRVLEWWRFPSEWLPNDFQPKKLSILKLSNNLYLAHKLDSLAKKLVSLKVLNFDYNDSLKEIADVSSLQTLEEFSFRGCKNLVTVHSSVGFLSKLKRLNAEYCEKLRTFPAAIKLPLLKDFSLCGCSSLVNFPEILEEMANVGWLDLKGTGIKDLPCSFHNLSGLRNLEIIWNEMCKIPSIIFMMPQLSSCYIEGGGKKRKVSSEKPEEDEEEGLQGILTHSLPSQHMMKALCLRDTNLSDDFFPLAVAWLPNVTQLSLRGNNFTVLPECMKEFCFLYLLIVDDCNHLQEIRGIPPCLTNFSAVNCKSLSPRATRVLLNQELHEGRWTIFAMPGGRIPRWFEKRCSGASISFWFHGTEFPDNALFFAILLKDGLPSPVEVLPIVTVNGNQVSCRWRETPVDQLFIFHLSETIAYNVILRFENKWNHAEISYEAHDYYTYDEVPTESIAKEIGIHLLKQKISSSIIQDIRFTDPYKMTQLIIMMMMISIVLPNHKKQPLLLETSIGYHFKDGHGYEHQFIKKIVQDISRKIGRLPLPVADFPVGLESPVSEGTSAIEIIHLEFPLFRKEGGEDPSKKEKNDDVEVKWDGTAFKEMKNLKTLIIKNGRFSRGPKYLPNSLRVLEWRRYPSRYFPSNFDPEKLSILKLPDYLYMSPKLDSISKMLITLKVLSFDYSDSLKEIPDVSNIQTLEEFSFEGCSNLVSVHSSVGFLPKLRILNAEKCPKLRSFPPVINLPSLEMLGLSGCSSLEKFPEIPEEMKNLEELDLIGTGIQDLPCSFCNLSRLWHLYLEENKMHKIPSVICMMPSLDFCNINLGGNKGRVSGEQEEGLHGIFTHSLPSSDMEHLSLKNSNLSDEFFPLAVAWFPNVEFLDLTGNNFTVFPECIQQFRFLKILKVDDCEHLREIRGIPPCLTDFSAVNCKSLSPRGTSVLLNQQVHEGRSTHFVMPGGSIPRGFEWRSSGASISFWFRGTIFPYKSLCVAILLKHDILSPPLQVKPTVTINGNQVQFGRYGLMGQLFIFNLKRDDYYYEAPHFKRGWNHVKLSYEAYYKGFEGKVPSESIGKEIGMHVWKEESSSIMEDIRFTDPYKMTQLIIMMIMLSIAFPNHKNHPLLLQTCIGYWTLLFLTMYDLDNDSELGSEGSNISDGSMASTELAGAELGCAQM 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03534 1261 Gene3D Ribonuclease Inhibitor 312 424 IPR032675 -
Aip05g03534 1261 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 472 IPR044974 GO:0006952
Aip05g03534 1261 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 681 1082 IPR044974 GO:0006952
Aip05g03534 1261 SUPERFAMILY L domain-like 688 1022 - -
Aip05g03534 1261 Pfam BspA type Leucine rich repeat region (6 copies) 759 858 IPR026906 -
Aip05g03534 1261 Pfam BspA type Leucine rich repeat region (6 copies) 154 233 IPR026906 -
Aip05g03534 1261 Gene3D Ribonuclease Inhibitor 62 310 IPR032675 -
Aip05g03534 1261 Gene3D Ribonuclease Inhibitor 857 1029 IPR032675 -
Aip05g03534 1261 Gene3D Ribonuclease Inhibitor 688 856 IPR032675 -
Aip05g03534 1261 PANTHER NB-ARC DOMAIN PROTEIN 1 472 - -
Aip05g03534 1261 PANTHER NB-ARC DOMAIN PROTEIN 681 1082 - -
Aip05g03534 1261 SUPERFAMILY L domain-like 72 411 - -
Aip05g03534 1261 SMART LRR_typ_2 857 879 IPR003591 -
Aip05g03534 1261 SMART LRR_typ_2 963 985 IPR003591 -
Aip05g03534 1261 SMART LRR_typ_2 352 375 IPR003591 -
Aip05g03534 1261 SMART LRR_typ_2 880 903 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03534 Aip-Chr5 142685665 142694404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03534 652 912 WRKY Transcription Factor Family AT4G12020 35.252 2.68e-28 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03534 - - aip:107644586 1254.97