Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03532 TTGAAAGCTTTGAATTTTGATTACAGTGATTCTTTGAAAGAAATACCTGATGTGTCTAGTCTTCAAACATTACAAGAATTTTCGTTCAAAGCATGTAGAAATTTAGTCACAGTTCACAGTTCAGTTGGTTTTTTAAATAAACTTAAAATATTGAATGCTGAAGATTGCGGCAAGCTGAGGAGTTTTCCGCCTTCTATCAATTTGCCCTCACTGGAAAAACTCCTTCTATCTGGTTGCTTGAGCCTTGAGGATTTTCCAGAAATTCTAGAAGAGATGGAAAATGTAAAAATGCTTCATTTGATTGGCAGTGGCATAAAAGATTTGCCATGTTCCTTTCGTGATCTTTCGGGATTGTGGCGTTTGGAAATGAGTGGGGATGAAATGTATAAGATACCGAGTGTCATTGCCATGATGCCACGACTGTCTTTGTGTGAGATAGAGTTAGGAGGCAATAAAGGGAGGGTATCAAGAAAACAGGAGGAGGGGCTTCATGGAATATTCACTCACTTCATCCCCTCTTCAAATATGAAATATCTTTATCTCACAAACAGCAATTTGTCAGATGACTTTTCTCCACTAGCTGTTGCATGGTTTCCCAATGTGGAAATTTTAGACTTAACAGGCAATAATTTCACAGTTCTTCCTGAATGCATCCAACAATTTCGCTTTCTATGGTGGCTCATAGTTGATCATTGCAAAAATCTTAGGGAGATTAAAGGGGTTCCACCAAACTTGAAAATTTTCTCTGCAGTAAACTGCAAATCCTGGAGTCCTGGGTGCACAAGTGTGTTACTCAATCAGGAAGTGCACGAGAATGGAAACACCGAATTTGCATTGCCTGGAGAATGTATTCCAAATTGGTTTGAGCAGCGCACGAAAGAAGGTTCTATTTCTTTCTGGTTTCGTGGCAGATTCCCTGCCAAAGATCTTTGTCTTGCAATTCTACTGAAGGATTGGTTCCGTTGGTCCCATCGTCCCCGCCTAAAGGATGTAACAACCATCGTGAGCATTAATGGCAAGCAAGTTTCCCGTGGCAGGGGGAGAACCAAAATGCAGAAATTATATATTTTTGATCTGTCCGTGACAAATAAAATGCATCATTTGGATGAAATATGTTTTGAAAACGAATGGAATCATGCGGAGGTTTCATTTGAACTTGAAGATGACGACATTATGGAGATTGGAATGCACATATTGAAGCAAAAGAGTAGTGGAATCATGGAAGATATTCAATTCACTGATCCTTATAGAAAGAGAAAACGAGACGATGAAGCTCTCAATAGTATTGCACAAAACTTGGCCTCCTTGAATGTTTTGAATTTTGACAACAGTGAATATTTGAAAGAGATACCTGATGTGTCCGGTCTTCTAACTTTACAAAAATTATCATTCAGTGGTTGTAAGAATTTGACTACAGTTCACAATTCAGTTGGTATCCTCAATAATCTTAAAGTCTTGAAAGCTGAAGATTGCGAGAGTCTTAGGACTTTTCCATCTATCAATTTGCCCTCACTTGAAATACTTATGTTGTCTGGTTGCTATAGACTTGCGAAATTCCCAGAAATACTAGGAAAGATGGAAAAGGTAGAAATGCTTCGTTTGTGTGGCACTAACATAAAAGATTTGCCATCGTCATTTCAAAACCTTTGTGAGTTGTCCTGTTTGAATCTGAGTGGCCATACCTTTCATAGGATACCAAGTGTGATCGTGAATATGCCAAAACTGTTTACATTATATATTGGGGGAGAACGCAATAAGACTTGGGAATCATGCAACAAGTTGGAAGAGGGGGTTGAAGGAACACTCAGCTCTTCAAATGTGACTAATCTTACTCTCGATAAGTATATGCTGTCAGATAACTTTTTTCCACTGGCACTTGCATGGTTTCGCAATGTGAAAACATTAGACCTGAGTAGCAACAGGTTCACAATCCTTCCCGAATGCATCCAAGATTTTCGCTTTCTAAGCTCCCTCAAAGTTGATTCATGCAAGAATCTAGTTAAGATTGCAGGAATTCCACCAAATTTGAAACAATTCTCGGCAGTAGGCTGCAGCAACTTGACTGAGGTCACAAGCATGTTACTCAATCAGGAACTGCACGAGAATGGAAGAACCGAGTTCGCATTGCCAGGAACAATGATTCCAGCATGGTTTGAAGAGCAGAGAAAGGGAGATTCTATTTCATTCTGGTTTCGTGGCGAGTTCCCTTCGAATGCACTTTGCTTTGCAATTCTAAAGCGGAATACGCGCAGCAGTGGAACTCCTATAACAACCATGGTGAGCATCAATGGCAAGCAAGTTTCCCGTGGAGATGGGAGAACCCAAACTTTTCAGGAACTATTTATTTTTGATCTGTCCATGACAAAAAAAACGTATCATTTGGATGGAATATGCTTTGAAAATAAATGGAATCATGCGAATGTTTCATTTAAAATTTATGACCTAATGGAGGAGTGTGGAATGCATATATTGAAGCAAGAGAGTAGTAGCATCATGAAAGATATTCGATTCACCAATCCTTGCATAAAGAATGACGATGAAGCTCTCCATGGTATTGGCAGCATTGACGTTCGTCTAAGGCTACAACCAGGTTCTGCAACTAGCCAACCAGCTTCGCAGAATCCTCTTGGGCATAGTGGAGACACGTCACATTCAAAAGGGAACTGGGCAGTGCCACAATTCAGGGGAGGCACTGTTTTTGCTAGGAGGAACATAAAAATGATGTTGTGTGTGATGTTTTATACAATGTTAAGCATTGTAGTGTGTGGTTTGGcACCACTATCGTCGCTGCTGGGACTCATCGCTGGAGTTACGGTCATCGCCGTTGAAGGGGCCGCGTCGGACGGAGACATTGCCATCGCTGAAGCTCACCGCTGGTGCAACCCGAAGCTATCTCCGCCTTTACTCTGCTCCACTGCGGCTGACCCATACCTCTCCCCTGTTCGTCAAAGCTTGTAG 2958 0.4097 LKALNFDYSDSLKEIPDVSSLQTLQEFSFKACRNLVTVHSSVGFLNKLKILNAEDCGKLRSFPPSINLPSLEKLLLSGCLSLEDFPEILEEMENVKMLHLIGSGIKDLPCSFRDLSGLWRLEMSGDEMYKIPSVIAMMPRLSLCEIELGGNKGRVSRKQEEGLHGIFTHFIPSSNMKYLYLTNSNLSDDFSPLAVAWFPNVEILDLTGNNFTVLPECIQQFRFLWWLIVDHCKNLREIKGVPPNLKIFSAVNCKSWSPGCTSVLLNQEVHENGNTEFALPGECIPNWFEQRTKEGSISFWFRGRFPAKDLCLAILLKDWFRWSHRPRLKDVTTIVSINGKQVSRGRGRTKMQKLYIFDLSVTNKMHHLDEICFENEWNHAEVSFELEDDDIMEIGMHILKQKSSGIMEDIQFTDPYRKRKRDDEALNSIAQNLASLNVLNFDNSEYLKEIPDVSGLLTLQKLSFSGCKNLTTVHNSVGILNNLKVLKAEDCESLRTFPSINLPSLEILMLSGCYRLAKFPEILGKMEKVEMLRLCGTNIKDLPSSFQNLCELSCLNLSGHTFHRIPSVIVNMPKLFTLYIGGERNKTWESCNKLEEGVEGTLSSSNVTNLTLDKYMLSDNFFPLALAWFRNVKTLDLSSNRFTILPECIQDFRFLSSLKVDSCKNLVKIAGIPPNLKQFSAVGCSNLTEVTSMLLNQELHENGRTEFALPGTMIPAWFEEQRKGDSISFWFRGEFPSNALCFAILKRNTRSSGTPITTMVSINGKQVSRGDGRTQTFQELFIFDLSMTKKTYHLDGICFENKWNHANVSFKIYDLMEECGMHILKQESSSIMKDIRFTNPCIKNDDEALHGIGSIDVRLRLQPGSATSQPASQNPLGHSGDTSHSKGNWAVPQFRGGTVFARRNIKMMLCVMFYTMLSIVVCGLAPLSSLLGLIAGVTVIAVEGAASDGDIAIAEAHRWCNPKLSPPLLCSTAADPYLSPVRQSL 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03532 985 Gene3D Ribonuclease Inhibitor 423 514 IPR032675 -
Aip05g03532 985 PANTHER NB-ARC DOMAIN PROTEIN 7 334 - -
Aip05g03532 985 PANTHER NB-ARC DOMAIN PROTEIN 437 753 - -
Aip05g03532 985 Gene3D Ribonuclease Inhibitor 1 90 IPR032675 -
Aip05g03532 985 Gene3D Ribonuclease Inhibitor 515 703 IPR032675 -
Aip05g03532 985 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 334 IPR044974 GO:0006952
Aip05g03532 985 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 437 753 IPR044974 GO:0006952
Aip05g03532 985 SUPERFAMILY L domain-like 1 253 - -
Aip05g03532 985 SMART LRR_typ_2 629 651 IPR003591 -
Aip05g03532 985 SMART LRR_typ_2 526 548 IPR003591 -
Aip05g03532 985 SMART LRR_typ_2 198 220 IPR003591 -
Aip05g03532 985 SUPERFAMILY L domain-like 427 693 - -
Aip05g03532 985 MobiDBLite consensus disorder prediction 864 889 - -
Aip05g03532 985 Gene3D Ribonuclease Inhibitor 91 272 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03532 Aip-Chr5 142650007 142676963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03532 432 582 WRKY Transcription Factor Family AT4G12020 33.987 1.11e-12 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03532 - - aip:107641393 835.099