Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03528 atgaacaacaaggtggacacatggaagaaggctctgaaagaagtagccaatttgtctggctATCATTTCGAAGATGGGCATGGATATGAACATGAGTTTATTAAAAAGATCGTGCAAGACATTTCAAGAAAGATTGGACGTCTACCTTTGCCAGTGGCTGACTTCCCTGTTGGACTCGAGTCTCCAATGTCaaaagatataattaaagttttggaagataatcaaGGAACTAGTGCCATTGAAATCATACATTTGGAATTTCCTTTATTTAGAAAGGAAAGGGGTGAAGAAAAGCTTTCCATACTCAAGTTGCCTTATTATCCCTACATGTCACTCAAGTTGGATAGCTTATCCAAGATGATGATCACCTTGAAAGCTGAAGGCTGCGACAAGCTCAGAAGTTTTCCACCTGTTATTAATTTGCCATCACTGGAAATACTCGGTTTATCTGGTTGCTCAAGTCTTGAGAAATTTCCAGAGATTCCAGAAGAGATGAAAAATCTAGAAGGGCTTATTTTGAATGAGACTAGCATAAAAGATTTGTCAAGTTCATTTTGTAACCTTTTTAGATTGCGGCGTTTGGATATGCAGTATAATGAAATGTATAAAATACCAAGTGTCATTGCCATGATGCCAAACTTGTATCGGTGTGATATTAAGTTAGGAGGAAGAAAGGGGAGGGTATCAGGGGAGCAAGAAGAGGAACTTCATGGAATACTCACTCACTCCGTCCCCTCTTCACATTTGAAATATCTTCCTCTCGAAAACAACAATTTGTGA 780 0.3436 MNNKVDTWKKALKEVANLSGYHFEDGHGYEHEFIKKIVQDISRKIGRLPLPVADFPVGLESPMSKDIIKVLEDNQGTSAIEIIHLEFPLFRKERGEEKLSILKLPYYPYMSLKLDSLSKMMITLKAEGCDKLRSFPPVINLPSLEILGLSGCSSLEKFPEIPEEMKNLEGLILNETSIKDLSSSFCNLFRLRRLDMQYNEMYKIPSVIAMMPNLYRCDIKLGGRKGRVSGEQEEELHGILTHSVPSSHLKYLPLENNNL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03528 259 Gene3D - 1 50 IPR035897 -
Aip05g03528 259 SUPERFAMILY RNI-like 118 259 - -
Aip05g03528 259 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 63 IPR044974 GO:0006952
Aip05g03528 259 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 64 214 IPR044974 GO:0006952
Aip05g03528 259 PANTHER ARCHAEAL ATPASE 10 63 - -
Aip05g03528 259 PANTHER ARCHAEAL ATPASE 64 214 - -
Aip05g03528 259 Gene3D Ribonuclease Inhibitor 60 259 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03528 Aip-Chr5 142466960 142470476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03528 119 214 WRKY Transcription Factor Family AT4G12020 38.144 3.41e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03528 - - aip:107644586 207.994