Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03512 atgttccaaacctcaccatcattttcacCAACTTCTCTTCGTTGTTCTCTGAACCCTTCTCTCTTCTCTCTCTCTCTCTCTCTTCGATCTCCCCTCAGCCTTGCAGGACTCCTGCATTCTGCGATAGCAGTTTCCAAGGTGGAAGGTGTCACGTTGAACTCTTTCATGTTTGAACGGGCCATTACCCATTTGGGAGCAATTGAATTGCTAGGAGAACGTTTTTCTTCTTCGAGAAAAAAGAATAAGCCCTCATTGTCAACAAGATCAAGCTGTATGCATTGCGAGCTGCACTGGCAACAACAGGAAAACATTGGTGCTGCAAACAGTGATGATGCCTTCTATAGGTATAAGATGCCCAAAATGATTACAAAAATCGAGGGTAGAGGGAATGGCATCAAGACAAATATTGTCAATATGGTTGACATTGCCAAGGCATTGGCAAGGCCAGCCTCTTACACAACCAAGTACTTTGGGTGTGAACTTGGAGCCCAGTCAAAGTTTGATGAGAAATCTGGTACTTCTCATGTTAATGGGGCGCACGACACTGCAAAACTTGCTGGCCTTCTTGAGAACTTCATCAAGAAATTTGTTCAATGTTATGGTTGTGGAAACCCCGAAACGGAGATATTGATTACCAAGAGCCAAATGATCCAGCTGAAATGTGCTGCCTGTGGTTTTGTGTCGGATGTGGATATGAGGGACAAGCTGACTACGTTTATTCTGAAGAACCCTCCGGAAACAAAGAAAGGATCCAAAGACAAGAAGGCCATGAGAAGAGCTGAGAAGGAGAGATTGAAGGAAGGTGAGATGGCTGATGAGGAGCAGAAGAAAATAAAAAAGGAGGTTAAGAAGAAAGGCTCATCTACTGTGAAGGATGGCTCTACAAAGCCATCCACTAAGAAGAAAGCTAGTGCCTCCGACGATGACCATATATCTCCTACTCACAGTCAAGTGGATGAGAAAGAAGATGCTTCTCAGGAAGATGATGATGACATCCAATGGCAAACAGATACATCACTAGAGGCTGCTCGCCAACGCATTCAAGAACAGCTAAGTGCTGTAACAGCTGATATGGTCATGCTCTCCACAAATGAGCCGGAGAAGAATGGAAAAACAGCAACCAAGGCAAGCAATGGTTCTCAAAATGGTGACTCAACTAACTACAGTACACTTGTTGAACTGAAGGCAATGCTGAATAAAGGTGTTGGGGCAAAGGATTTGCAGTCTCATCTGGCAGCACTTCCTGCATCTGCTCAAGACAAGACAAATGCTCTATTTGAGGCCTTATTTGAGGGCATCGAGAAAGGATTTGGAAAAGAAGTGATCAAGAAGAAGAGTTACCTTGCCGCTGCAGTCTCTATGGAGGAAGGATCACAGTTACTGTTGCTTGGTGCAATTGAGGCTTTCTGTATGAAGTCTACTTCCAGTGCTCTGAAGGAAGTTGCCCTTATTTTGAAGGCTCTGTATGATGCTGATGTACTGGAGGAAGAGAACGTATTGCAGTGGTATCAAGTTGGGACGAAGGGCATTAACAAGGACTCTAAGATATGGAAGAATGCCAAACCTTTCATTGATTGGCTTCAAAGTGCGGAATCAGAGTCAGAGGAAGATTGA 1614 0.4349 MFQTSPSFSPTSLRCSLNPSLFSLSLSLRSPLSLAGLLHSAIAVSKVEGVTLNSFMFERAITHLGAIELLGERFSSSRKKNKPSLSTRSSCMHCELHWQQQENIGAANSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKSGTSHVNGAHDTAKLAGLLENFIKKFVQCYGCGNPETEILITKSQMIQLKCAACGFVSDVDMRDKLTTFILKNPPETKKGSKDKKAMRRAEKERLKEGEMADEEQKKIKKEVKKKGSSTVKDGSTKPSTKKKASASDDDHISPTHSQVDEKEDASQEDDDDIQWQTDTSLEAARQRIQEQLSAVTADMVMLSTNEPEKNGKTATKASNGSQNGDSTNYSTLVELKAMLNKGVGAKDLQSHLAALPASAQDKTNALFEALFEGIEKGFGKEVIKKKSYLAAAVSMEEGSQLLLLGAIEAFCMKSTSSALKEVALILKALYDADVLEEENVLQWYQVGTKGINKDSKIWKNAKPFIDWLQSAESESEED 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03512 537 MobiDBLite consensus disorder prediction 364 384 - -
Aip05g03512 537 Gene3D - 203 243 - -
Aip05g03512 537 Gene3D - 97 202 - -
Aip05g03512 537 SMART eIF2Bneu4 113 227 IPR002735 GO:0003743|GO:0006413
Aip05g03512 537 CDD W2_eIF5 391 535 - -
Aip05g03512 537 ProSiteProfiles W2 domain profile. 378 537 IPR003307 GO:0005515
Aip05g03512 537 Pfam Domain found in IF2B/IF5 109 225 IPR002735 GO:0003743|GO:0006413
Aip05g03512 537 Gene3D - 388 537 - -
Aip05g03512 537 SMART 542_3 445 533 IPR003307 GO:0005515
Aip05g03512 537 MobiDBLite consensus disorder prediction 242 331 - -
Aip05g03512 537 MobiDBLite consensus disorder prediction 365 384 - -
Aip05g03512 537 Pfam eIF4-gamma/eIF5/eIF2-epsilon 459 537 IPR003307 GO:0005515
Aip05g03512 537 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 109 199 IPR016189 GO:0003743|GO:0006413
Aip05g03512 537 SUPERFAMILY ARM repeat 406 531 IPR016024 -
Aip05g03512 537 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 102 537 - -
Aip05g03512 537 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 102 537 IPR045196 GO:0003743|GO:0006413
Aip05g03512 537 MobiDBLite consensus disorder prediction 246 322 - -
Aip05g03512 537 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 196 231 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03512 Aip-Chr5 142320828 142324282 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03512 102 530 Eukaryotic Initiation Factors Gene Family AT1G77840 62.759 1.18e-179 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03512 K03262 - gmx:100778073 680.633