Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03510 ATGGCCTTACAAAACATCGGTGCTGCAAACAGTGATGATGCCTTCTATAGGTATAAGATGCCCAAAATGATTACCAAAATCGAGGGTAGAGGGAATGGCATCAAGACAAATATTGTCAATATGGTTGATATTGCCAAGGCATTGGCAAGGCCAGCCTCTTACACAACCAAGTACTTTGGGTGTGAGCTTGGAGCCCAGTCAAAATTTGACGAGAAATCTGGTACTTCTCATGTTAATGGGGCACACGACACTGCAAAACTTGCTGGTCTTCTTGAGAACTTCATCAAGAAATTTGTTCAATGTTATGGTTGTGGAAACCCCGAAACGGAGATATTGATTACCAAGAACCAAATGATCCAACTGAACTGTGCTGCCTGTGGTTTTGTGTCAGATGTGGATATGAGGGACAAGCTGACTACGTTTATTCTGAAAAACCCTCCTGAAACAAAGAAAGGATCCAAAGACAAGAAGGCCATGAGAAGAGCTGAGAAGGAGAGATTGAAGGAAGGTGAAATGGCTGATGAGGAGCAGAAGAAAATCAAGAAGGAGGTTAAGAAGAAAGGCTCTTCCACTTCCAAGGATGGTACTACAAAGTCAGCCTCTAAGAAGAAAGCAAGTGCCTCTGATGATGACCATGTATCTCCTACTCACAGTCAAGTGGATGAGAAAGAAGATGCTTCTCAGGAAGAAGATGGCGATGATGACATCCAATGGCAAACGGATACATCACTAGAGGCTGCTCGCCAACGCATTCAAGAACAGCTAAGTGCTGTAACAGCTGATATGGTCATGCTCTCCACAAATGAGCCTGAGAAGAATGGAAAAACAGCAAGCAAGACAAGCAACGATTCTGAAAATGGTGACTCACATGACTACAGTACACTTGTTGGAGAAGTGAAGGCAATTTTGAATAAAGGTATTGCAGCAAAGGATTTGCATTCCCATCTGGCAGCACTTCCTGCATCTGCACAAGACAAGACAAATGCTCTATTTGAGGCCTTATTTGAGGGCATTGAGAAAGGATTTGCAAAAGAAGTGATCAAGAAGAAGAGCTACCTTGCTGCGGGAGTTTCTAAGGAGGAGGGGTCACAGTTACTCCTGCTTAGTGCAATTGAGGCTTTCTGTCTCAACTCTACTTCCAGTGCTCTGAAGGAAGCTGCTCTTATTTTGAAGGCTCTGTATGATGCTGATCTATTGGACGAAGAGAACATATTGCAGTGGTACCAAGACGGATTGAAGGGCAAAAACAAGGACTCTAAGATATGGAAGAATGTCAAACCTTTCATTGATTGGCTTCAGAGTGCGGAATCAGAATCAGAGGAAGAATGA 1329 0.4334 MALQNIGAANSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKSGTSHVNGAHDTAKLAGLLENFIKKFVQCYGCGNPETEILITKNQMIQLNCAACGFVSDVDMRDKLTTFILKNPPETKKGSKDKKAMRRAEKERLKEGEMADEEQKKIKKEVKKKGSSTSKDGTTKSASKKKASASDDDHVSPTHSQVDEKEDASQEEDGDDDIQWQTDTSLEAARQRIQEQLSAVTADMVMLSTNEPEKNGKTASKTSNDSENGDSHDYSTLVGEVKAILNKGIAAKDLHSHLAALPASAQDKTNALFEALFEGIEKGFAKEVIKKKSYLAAGVSKEEGSQLLLLSAIEAFCLNSTSSALKEAALILKALYDADLLDEENILQWYQDGLKGKNKDSKIWKNVKPFIDWLQSAESESEEE 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03510 442 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Aip05g03510 442 MobiDBLite consensus disorder prediction 267 291 - -
Aip05g03510 442 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Aip05g03510 442 SUPERFAMILY ARM repeat 292 436 IPR016024 -
Aip05g03510 442 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
Aip05g03510 442 CDD W2_eIF5 308 435 - -
Aip05g03510 442 SMART 542_3 350 438 IPR003307 GO:0005515
Aip05g03510 442 Gene3D - 105 145 - -
Aip05g03510 442 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Aip05g03510 442 MobiDBLite consensus disorder prediction 148 224 - -
Aip05g03510 442 Pfam eIF4-gamma/eIF5/eIF2-epsilon 364 442 IPR003307 GO:0005515
Aip05g03510 442 MobiDBLite consensus disorder prediction 144 235 - -
Aip05g03510 442 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 442 IPR045196 GO:0003743|GO:0006413
Aip05g03510 442 Gene3D - 289 442 - -
Aip05g03510 442 Gene3D - 2 104 - -
Aip05g03510 442 MobiDBLite consensus disorder prediction 269 291 - -
Aip05g03510 442 ProSiteProfiles W2 domain profile. 285 442 IPR003307 GO:0005515
Aip05g03510 442 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03510 Aip-Chr5 142312619 142313947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03510 1 435 Eukaryotic Initiation Factors Gene Family AT1G77840 62.358 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03510 K03262 - gmx:100796565 665.611