Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03506 ATGGCGGAGAGTGGGGGTCGTAGTGGTAGTGCCAGTGTGTGGGAGGGTGTATTGGAGCTTACCAAGTGGGCGCAGCATCACAACACGGACCCACTATTATGGTCCATTCAGCTCACCTCCGCCCTCAACGCCGCCTCCGTCCGCCTCCCCTCGCCGGAGCTAGCCTACCGTCTCGTTTCCCACATCTGCTGGGAAAATCACGTGCCTATCACGTGGAAGCTTCTAGAAAAATCTATTTCCGTTAATATCGCTCCTCCGCTACTCGTCCTCTCTCTCCTCTCCTCCGCGGTCATCCCCTGCCGCCGCCTCCACCCCTCCGCCTTCCGCCTCTACCTCGACCTCCTCAACCGCCACGCCTTCTCTTCTCTCTCCTCCACAATAACTTCCCCTAACTACCGTACCGTTATGGATTCCGTTGACGCTGTTCTTCAGTTGTCGAAGGTGTACGGTACTTGCAGCGAATCTGAGGATGGCGGCGCTGGCGGTGTTGTTATTGTTAGGTTCGTTTTTACGGTTGTGTGGCAGTTGGTGGAGGCGTCGTTGGAAGATGAAGGGTTGCTTGAGCACAAGCCTAGGTGGTGGATGAATAATAATGGAGGTTTGGGTGGTGACGGTGGTGGTGATGGCGGGAGCTACTTTTCCGAGCAGAAAGAGGGTTTGCAGCGGGCGAATACGGCAATGGCTATTGAGACAATTGCGAGGTTCATGAGTGACAAAGTAACTTCGAGAATACTTTCGCTGGTTCATCGAAACATGCCAAATCATTGGGTGGCTTTTGTTCAACAACTACAGAGGCTTGCAGCAAATTCATTAGTTTTGAGGAACATGAAGCATGTTACTCCTGACTCCCTTTTACCTTTTGATTTGAAATCTAATAAAGGGTTTAAACTATTGTCTCCTGAATTCAAAACAACACGTAAATTGGAACTTAATGCAGTCATGGCAGCTGCTGCTGGATCTGTTCAATCCTGTAATGACACTTGGTCTTTGCTTTGGCTTCCTATTGATCTTGTTCTTGAAGATGCAATGGATGGAGATAATGTGGCAGAGACTAGTGTTGTTCAAGTTCTTTCTGGTCTGGTGAAGGCTTTAAAAGCAGTTAATGGCACTGCATGGCACAAGGCTTTTTTAGGATTATGGATTGCAGCACTACGACTTGTTCAAAGAGAGCGGGATCCAAGTGAGGGTCCAGTACCCCGCCTTGATACTTGCTTGTGTATGCTATTATGCATTACAACCCTTGTGGTTGCTAATATCATCGAAGAAGAGGAAGGTGAACTGATGGAAGAAGCTGTACGTAGCCCTACTAATCAAAGTAAGGACAACCAGGCTTTGGGTTTTTTTGGAAGACCAAATATATCATATGACCCCATCTTAGACATGCCTGAGTTAGGTTTACTGAATCCTCCTCAATCTGTTACCTCGGTAGCCAATCAGGCTGCTGCCAAAGCTGCTATGTTTGTATCAGGGCATGCTGTTGGTAATGGATACTTGGAATCCATGAACGTGAATGAGTTGCCTACAAACTACTCTGGTAACTTGTGGCATCTGATTGTCGAGGCCTGTATTGCAAGAAAACTGATTGATACTACAGCTTATTTTTGGCCCGGTTATGTGAGTGCGGCTTACAATCAACTACCTCACAGCATTCCTAACCATTTACCTAGCTGGTCATCATTGGTGAAGGGATCACCACTAACTCCTCAGTTGGTTAATGTCCTAGTGGCAACTCCTGCTTCCAGCTTAGCGGAGATTGAGAAAATATTTGAGCTTGCAAGAAATGGCTCGGATGAAGAGAAGTTATCTGCTGTTACTGTTCTTTGTGGGGCATCACTAGTACGTGGTTGGAATGTGCAGGAGCACATCATATTTTTCATCATAAACTTGCTGTCACTTGCAGTTCCTCCCAACTACTCTGGAAGTGAAAGCCATTTGATCAGCCATGCACCATTTTTGAATGTCCTCCTGGTAGGAACTTCATCCGTAGACAGTGTTCAGATGTTCTCCCTCCATGGTGCGGTTCCTCTACTTGCAGCTGCGCTAATGCCAATATGTGAGGTTTTTGGCTCATGTGTTCCTAATGTGTCCTGGAGTTCTGCAAGTGGAGAAAAGAACTCTTGTCATGCAGTGTTCTCTAATGCATTTATTCTACTACTAAGGTTGTGGAGGTTCAATCATCCACCTATTGAACATGTAATGGCGGGTGCAGCATCTCCAGCATTTGGATCGAAGTTAGGTCCTGAGTACCTTCTATTGGTTCGGAATTGTGGCTTAGCTGAGTTTGGGAAATCACCAAAAGATCAGATAAGCAGCAGGAGATTTTCAAAAATGATTAGTCTTTCTCTAGAGCCCATAGTTATGGATTCGTTTCCAAAATTAAAAACTTGGTATCGACAACATCAAGAATGTATCGCATCAACCCGATCTGCTCTTGCTCCTGGAGGGCCTGTTTATCAGATTGCTGATTCACTACTGAGCATAATGTTCAGGAAAATAAATAGAAGTGGTCAGTCGTTGACTCCTTCAACTTCAGGAAGCAGTAATTCATCTAGTTCTTCACTGGATGATGCTTTGATGAAACTCAAGGTGCCGGCATGGGATATTCTTGAAGCAGTTCCGTTCGTTCTTGATGCTGCTCTTACAGCTTGTGCTCATGGAAGAGTTTCTCCCCGTGAATTGGCTACAGGTCTCAAAGATCTTGCTGATTTTCTTCCGGCAACTTTGGCTACAACTGTAAGCTACTTATCAGCTGAAGTTACACGTGGTCTATGGAAGCCGGCTTTTATGAATGGAACTGATTGGCCTAGCCCTGCAGCAAATTTATCAACCGTGGACCAACAGATCAAGAAAATTTTAGCGGCCACAGGTGTTGATGTCCCAAGCCTTGCTATAGATGGCAGTGTTCCAGCTACACTTCCTTTGCCCTTGGCAGCTTTTCTAAGCCTTACCATAACATATAAACTGGACAAAAATACTGAGCGCATCCTTGTGTTGATTGGCCCGTCGTTGATTGCCCTTTCTGCTGGTTGCCCCTGGCCATGCATGCCCATTGTAGGTTCTTTGTGGGCTCAGAAGGTAAAGCGATGGAGTGACTTTTTTGTTTTCTCTGCTTCTAGAACCGTCTTCCACCACAGTAGGGATGCTGTAGTTCAGCTCCTAAAGAGTTGCTTTGCATCCACCCTAGGGCTTGATTCTGCCTGTCTTTATAAGAATGGTGGTGTTGGTGCCCTCCTTGGTCATGGCTTTGGTTCTCACATTTATGGCGGGATGTCCCCAGTTGCCCCTGGGATTCTCTACTTAAGAGTTCACAGGTCTATTAGAGACGTCATATTCTTGACAGAAGAGATTTTATCTCTTCTAATGCTTTCGGTGAGAGAGATAGTAACTGGCGAGTTGCTGAAGGGTAAACAGGAGAAGATAAAGAAGACCAAGCATGGAATGAGATATGGACATGTTTCTCTTGCTGCATCAATGACACGTGTCAAGCATGCCGCACTTCTGGGGGCTTCCTTTCTTTGGATATCTGGTGGTTCAGGTTTGGTTCAATCTTTGTTAACCGAAACATTCCCTTCCTGGTTTTTATCAACTCAAGATTTTGAGCAGGAAGTTGGAGAGTCTGGAGTAAAGGTTGCCATGCTGAGAGGCTATGCACTGGCATGTTTTGCTGTGCTAAGTGGGATGTTTGCTTGGGGTATAGACTCTTCGTCGCCCACATCGAGACGGCGACCAAAGATTCTTGGGATCCATTTAGATTTTCTTGCCAACGCCATGAACAGTAAAGTATCACTGCGCTGTGATTATGCGACCTGGCGTGCTTATATGACCGGGTTCATAAGCTTGATTGTAAATTGCGCGCCTCTGTGGATCGAGGAACTTGATGTGGGTGTGTTGAAGAGAGTGAGCAAGGGATTAAGACAGTTCGACGAAGAAGATTTGGCTCTGCGCCTTTTAGAAATCAAAGGCACAAGGGCCATGGGTGAGacagggacttatggagaagcattGGCTGTGCATGAGGCTAATAATGTGGAGAGGCTTAAGAGATGGAAAATGGCTTTGGAGAAAATAGCAGACTTGTCTGGTTATCATTTCAAACACGGGGATGGATATGAGCACAAGTTTGTTGCCAAGATTGTTGGACATGTATCAATAGAGATTAAACGTGCCACTTTACCTATTGTAGATCACCCAGTTGGATTGGATTCCCAAGTGGAAAATGTAATTTCCCTTTTGAATGTTGGGTCTAGTGATGGAGTTTGCGTGCTCGGGATTCATGGAATTGGTGGAATAGGTAAAACAACACTGGCTGTGGCAGTGTATAATTGGCTTGTCAATCATTTTGCAGTTTTATGTTTTGAAAATATGTGTTTCCATGAAAATACAAGAGAGAATTCAAATAAATATGGATTAAAACATCTGCAGAAGACCCTTCTGTTTGAACTAGTTGGAGAAAATAAAGTTGCATTGATGAGTGTTAGAGAAGGAATATCAATGTTAAAGCAAAAACTCCAACGAAAGAAAATTCTTTTGATTCTAGATGACATTGACCAACAAGAGCAATTAGATGCTCTAGCTGGAAATCTTGATTGGTTTAGTCCTGGTAGTAGAGTTATCATCACAACTCGGGACACAAGTTTGCTATCAAGGTATGAGGATAGAATAACATATGAGTTAGATAAGttgactgatgaagattctctagaattgctcagtttcaaagctttaaaaattaacaaagttgatccaagttacttagacatcttgagcagtgtggtaacttatgcttctggcctaccattggctttggaagttatgggatccaactttctgggcaaaagtatagaacagtggaaatctgcattagatcaatacagaagaattcccaataaaaagatacaaaatgtgcttaaggtaagctttgatggattggaggaatttgagaaggaaatttttcttgatattgcttgttgtttcaatggatgtgaattgaaagatgtcaaaaggatactttgtgctcatcataatgtcgacaccttggaatatggacttaaagtgttggttgaaaaatcactaataaaaatggatgcatatcgtggaataatcttgcatgccctcattcaagacatgggtagagaaattgtgcgtcaagaatcaccaaaaaagcctgggaagcgtagtcgattatggCTCCTCGAAGATATAGTTCAAGTTTTTGAAATGAATATGGGATCTGACAAAATTGAAATGATACATATGGATTTTCCCAAGTTTGAAAAAGTAATAAGATGGGATGGAGAGGCTTTCAAGAAAATGAGAAATCTCAAAACACTATTTATTAGGCATACTTATTTTTCCCAAGGTCCCAAGTATCTTCCAAATTGTTTAAGAGTGTTGAATTGGGAGGAATATCCTTCACCTTGTTTACCACTTGATTTTCATCCGGAGGGACTTGTCATATTCCAATTATCCGGCAAGAGTATACAGTCAGTTAGGTTTCTTGAAAAGCAAAAGTACATGAGCTTGACGGTCATAAATCTTGATCATTCTAATGTAGAAGAGATACCTGATATATCCGGAGTCCCAAATTTAGTAAACCTATCATTGAATATGTGCTTGAATTTAATTAAAATTCACGAATCAATTGTATTCTTAGATAGACTTAGCATATTGAGTGCTCAAGGTTGCAGGAGGCTTAAGAGATTTCCATCTATCAAGTTGACCAATCTTGTACATCTCTGTCTTTCAGGGTGCTCTAGTCTTGAACATTTTCCAAAAATGTTAGGGAAATTAAAGAATATACTAACAATTTATTCGGATGGTACTCTGATAAAAGAATTGCCATCTGCTATTAAAAGGTTTTGTTTGATTAGCCATTCAAGTATGATAAAACATGGAGCAAGTTCCCCACCAGCACTAAGTTCCCCAATTGTCATGTCTCCAGATGAAGAGAAAGTGACTTCTGAGAGGTCTGAAGTAGATGTTGAAGAAGAACAAGGGAGTCCAATGGCACCTTTGGAGGCAAAACATTCTGCCTGCAAACTACCAGATTTGCTCCATGAATCTTTTACAACTTATCTTACCTGGTTTCGCAATGTGGAAGATTTAGACCTGTCAGAGCATAATTTCACAGTTCTTGATGAAAGCCTCAAAGAACTTTGCTCCTTGAGGTCACTTAGTTTGAATGGCTGCAGAGAACTTCGAGAAATTAAAGGGATTCCACCAAACATAAAGTATTTCTCTGCAAGAAACTGCATATCCTTGACTTACCCCAGCAAAAACATGTTACTTAACAAGGAATTGCATGAGGATGGAGCCAAGGATTTTGTTCTTCCAAGTAGTAGCATTCCAAAGTGGGTGGAGCATAGTAGCAACAATGATTCAATTTCTTTCTGGTTTCACAACAAGCTTCCTGAAATCTCTTTATGTGTTCTTGTTGGACCTGCAGTTGATTTTTCGCGTACACACATTTGTCCGGAGTTTATCATCAACAGCAGCAGAGGTCAAGCGGAACATCTTGAATCAGTGGAGACATCCAATCAATTAGTGGATCATATATTTATTACTGATCCAAAATTGATGAAGTCCAAAGTGAATGAAGTGATTTTAGAAAATGAATGGAATCATGTTGTGTGTACAATTAAGTCTTGTGGCCAAAGGGGACCAGCTATCAAGAAACTTGGAATCTATTTTCACAAAGATAGAAGTAGCATGGCGAATATTCAATTTATTGATCCTCTGTTGCATAAAGAAGAGTTGATCATGGGAAATTTTCAGGTAAATATGCAACAACAGAAGTATATGGCATCACATGAAAGGAGGCTTTCATTGGATCTTCCTTTAGGAATGAGTTTTTCATTGAATGATCATGTGAGCAGGGAACCAAATTCCAGTGTGCAAGGTAATTTACATTGA 6912 0.3951 MAESGGRSGSASVWEGVLELTKWAQHHNTDPLLWSIQLTSALNAASVRLPSPELAYRLVSHICWENHVPITWKLLEKSISVNIAPPLLVLSLLSSAVIPCRRLHPSAFRLYLDLLNRHAFSSLSSTITSPNYRTVMDSVDAVLQLSKVYGTCSESEDGGAGGVVIVRFVFTVVWQLVEASLEDEGLLEHKPRWWMNNNGGLGGDGGGDGGSYFSEQKEGLQRANTAMAIETIARFMSDKVTSRILSLVHRNMPNHWVAFVQQLQRLAANSLVLRNMKHVTPDSLLPFDLKSNKGFKLLSPEFKTTRKLELNAVMAAAAGSVQSCNDTWSLLWLPIDLVLEDAMDGDNVAETSVVQVLSGLVKALKAVNGTAWHKAFLGLWIAALRLVQRERDPSEGPVPRLDTCLCMLLCITTLVVANIIEEEEGELMEEAVRSPTNQSKDNQALGFFGRPNISYDPILDMPELGLLNPPQSVTSVANQAAAKAAMFVSGHAVGNGYLESMNVNELPTNYSGNLWHLIVEACIARKLIDTTAYFWPGYVSAAYNQLPHSIPNHLPSWSSLVKGSPLTPQLVNVLVATPASSLAEIEKIFELARNGSDEEKLSAVTVLCGASLVRGWNVQEHIIFFIINLLSLAVPPNYSGSESHLISHAPFLNVLLVGTSSVDSVQMFSLHGAVPLLAAALMPICEVFGSCVPNVSWSSASGEKNSCHAVFSNAFILLLRLWRFNHPPIEHVMAGAASPAFGSKLGPEYLLLVRNCGLAEFGKSPKDQISSRRFSKMISLSLEPIVMDSFPKLKTWYRQHQECIASTRSALAPGGPVYQIADSLLSIMFRKINRSGQSLTPSTSGSSNSSSSSLDDALMKLKVPAWDILEAVPFVLDAALTACAHGRVSPRELATGLKDLADFLPATLATTVSYLSAEVTRGLWKPAFMNGTDWPSPAANLSTVDQQIKKILAATGVDVPSLAIDGSVPATLPLPLAAFLSLTITYKLDKNTERILVLIGPSLIALSAGCPWPCMPIVGSLWAQKVKRWSDFFVFSASRTVFHHSRDAVVQLLKSCFASTLGLDSACLYKNGGVGALLGHGFGSHIYGGMSPVAPGILYLRVHRSIRDVIFLTEEILSLLMLSVREIVTGELLKGKQEKIKKTKHGMRYGHVSLAASMTRVKHAALLGASFLWISGGSGLVQSLLTETFPSWFLSTQDFEQEVGESGVKVAMLRGYALACFAVLSGMFAWGIDSSSPTSRRRPKILGIHLDFLANAMNSKVSLRCDYATWRAYMTGFISLIVNCAPLWIEELDVGVLKRVSKGLRQFDEEDLALRLLEIKGTRAMGETGTYGEALAVHEANNVERLKRWKMALEKIADLSGYHFKHGDGYEHKFVAKIVGHVSIEIKRATLPIVDHPVGLDSQVENVISLLNVGSSDGVCVLGIHGIGGIGKTTLAVAVYNWLVNHFAVLCFENMCFHENTRENSNKYGLKHLQKTLLFELVGENKVALMSVREGISMLKQKLQRKKILLILDDIDQQEQLDALAGNLDWFSPGSRVIITTRDTSLLSRYEDRITYELDKLTDEDSLELLSFKALKINKVDPSYLDILSSVVTYASGLPLALEVMGSNFLGKSIEQWKSALDQYRRIPNKKIQNVLKVSFDGLEEFEKEIFLDIACCFNGCELKDVKRILCAHHNVDTLEYGLKVLVEKSLIKMDAYRGIILHALIQDMGREIVRQESPKKPGKRSRLWLLEDIVQVFEMNMGSDKIEMIHMDFPKFEKVIRWDGEAFKKMRNLKTLFIRHTYFSQGPKYLPNCLRVLNWEEYPSPCLPLDFHPEGLVIFQLSGKSIQSVRFLEKQKYMSLTVINLDHSNVEEIPDISGVPNLVNLSLNMCLNLIKIHESIVFLDRLSILSAQGCRRLKRFPSIKLTNLVHLCLSGCSSLEHFPKMLGKLKNILTIYSDGTLIKELPSAIKRFCLISHSSMIKHGASSPPALSSPIVMSPDEEKVTSERSEVDVEEEQGSPMAPLEAKHSACKLPDLLHESFTTYLTWFRNVEDLDLSEHNFTVLDESLKELCSLRSLSLNGCRELREIKGIPPNIKYFSARNCISLTYPSKNMLLNKELHEDGAKDFVLPSSSIPKWVEHSSNNDSISFWFHNKLPEISLCVLVGPAVDFSRTHICPEFIINSSRGQAEHLESVETSNQLVDHIFITDPKLMKSKVNEVILENEWNHVVCTIKSCGQRGPAIKKLGIYFHKDRSSMANIQFIDPLLHKEELIMGNFQVNMQQQKYMASHERRLSLDLPLGMSFSLNDHVSREPNSSVQGNLH 2303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03506 2303 Gene3D Ribonuclease Inhibitor 1982 2102 IPR032675 -
Aip05g03506 2303 PRINTS Disease resistance protein signature 1595 1609 - -
Aip05g03506 2303 PRINTS Disease resistance protein signature 1502 1516 - -
Aip05g03506 2303 PRINTS Disease resistance protein signature 1421 1436 - -
Aip05g03506 2303 PRINTS Disease resistance protein signature 2050 2066 - -
Aip05g03506 2303 Gene3D - 1560 1644 IPR042197 -
Aip05g03506 2303 PANTHER OS07G0681500 PROTEIN 24 1328 IPR039638 GO:0016592|GO:2000762
Aip05g03506 2303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1390 1654 IPR027417 -
Aip05g03506 2303 MobiDBLite consensus disorder prediction 1966 1990 - -
Aip05g03506 2303 Pfam NB-ARC domain 1402 1628 IPR002182 GO:0043531
Aip05g03506 2303 Gene3D - 1317 1384 IPR035897 -
Aip05g03506 2303 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33A 24 1328 - -
Aip05g03506 2303 SUPERFAMILY L domain-like 1760 2095 - -
Aip05g03506 2303 Gene3D Ribonuclease Inhibitor 1743 1968 IPR032675 -
Aip05g03506 2303 SUPERFAMILY "Winged helix" DNA-binding domain 1630 1738 IPR036390 -
Aip05g03506 2303 Gene3D - 1385 1555 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03506 Aip-Chr5 142258804 142277308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03506 1337 1956 WRKY Transcription Factor Family AT4G12020 31.555 3.93e-67 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03506 - - adu:107489981 2346.62