Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03494 ATGGCCCCATTCTCAAAAAAAATTGCATTACCAATTTCTCTTCTATTAACCCTAATTGTTGCTTTGCATTTCAATGGGTGTGAGAGCGGCTTGTTCTCCAAAACAAAAGTTGAGGTGTTTAACAAATTGCCGAACAACCATAAACTTGGTCTTCATTGCAAAGACAAGCACCATGATCTTGGTGCTCAAACACTTGAACCTAATCAATCATGGAGTTTCAGATTCCTCCCCGATATCTTCCACGACGTAACCTTATACTTTTGTCGATTTTATTGGGTAAGTGGTGATCATTTTTTTGACATTTATGTTCAAGATAGAGACAAATCAATTGGACATTATCAACCTTGGAATATCACTGAATCAGGTCCATGCAGGCATAGATGGGATCTTAACTCGGATCAATGTTTCTATTGGAACAAGGCTTAA 426 0.3779 MAPFSKKIALPISLLLTLIVALHFNGCESGLFSKTKVEVFNKLPNNHKLGLHCKDKHHDLGAQTLEPNQSWSFRFLPDIFHDVTLYFCRFYWVSGDHFFDIYVQDRDKSIGHYQPWNITESGPCRHRWDLNSDQCFYWNKA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03494 141 Pfam Plant self-incompatibility protein S1 36 138 IPR010264 -
Aip05g03494 141 PANTHER S-PROTEIN HOMOLOG 2 15 138 - -
Aip05g03494 141 PANTHER - 15 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03494 Aip-Chr5 142027002 142027427 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03494 34 139 Carbohydrate Esterase AT3G16970 38.739 6.23e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03494 - - mtr:MTR_6g004310 122.864