Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03493 ATGACTATATCACTCTCCAAAGTAGTAGTATCAATGTCAATGTTATTAGCCATAATTTTTTCCTTGAATTTCAATGTTGGAGTGGGTGGTGAGGATGACTTGATTCCACCACCCATAGTGGTAGTTTCCATTTACAATAGATTGAACAATAAGGAGCTTGGTGTTCATTGCAAAGACAAACACACAGATTTTGGATTCCAAAGAGTTTCAGTTGGGCATATGTGGGGTTTCACCTTCCGTCCTAATCCTCTTTGGTTCACATCATTATACTTTTGCAGCTTTACATGGTATGGAGCACCAGTTCACCGCTTTGACATTTATGATCACAACCGTGACAAGCATGCTTGTGAAACTTGTGTTTGGGATATCTTTGAAACTGGTCCATGCAGGGCTACGGATAATGATTCTGTACAATGTTATGCTTGGAAACAATAA 435 0.3908 MTISLSKVVVSMSMLLAIIFSLNFNVGVGGEDDLIPPPIVVVSIYNRLNNKELGVHCKDKHTDFGFQRVSVGHMWGFTFRPNPLWFTSLYFCSFTWYGAPVHRFDIYDHNRDKHACETCVWDIFETGPCRATDNDSVQCYAWKQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03493 144 PANTHER S-PROTEIN HOMOLOG 18-RELATED 33 142 - -
Aip05g03493 144 PANTHER - 33 142 IPR010264 -
Aip05g03493 144 Pfam Plant self-incompatibility protein S1 42 142 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03493 Aip-Chr5 141987248 141987709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03493 30 142 Carbohydrate Esterase AT3G16970 35.938 1.66e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03493 - - adu:107489935 140.584