Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03492 ATGTCAATGTTATTAGCCATAATTTTTTCCTTGAATTTCAATGTTGGAGTGGGTGGTGATCATGAGGATGGCTGGATTCCACCAGCCACAGTGGTAGTTTCCATTTACAATAGATTGAACAATAAGCAGCTTGGTGTTCATTGCAAAGACAAACACACAGATTTTGGATTCCAAAGAGTATCAGGTGGGCATATGTGGGGTTTCACCTTCTATCCTAATCCTCTTTGGTTCACATCATTATACTTTTGCAGCTTTACATGGTATGGAGCACCAGTTCACTACTTTGACATTTATGATCACAAACGTGACAAGAATGCCTGTGCAACTTGTGTTTGGGATATCTTTGAAACTGGTCCATGCAGGGTTACGGATAATGCTTCTCTACAATGTTATGCTTGGAAACAATAA 408 0.3946 MSMLLAIIFSLNFNVGVGGDHEDGWIPPATVVVSIYNRLNNKQLGVHCKDKHTDFGFQRVSGGHMWGFTFYPNPLWFTSLYFCSFTWYGAPVHYFDIYDHKRDKNACATCVWDIFETGPCRVTDNASLQCYAWKQ 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03492 135 PANTHER - 28 133 IPR010264 -
Aip05g03492 135 Pfam Plant self-incompatibility protein S1 33 133 IPR010264 -
Aip05g03492 135 PANTHER S-PROTEIN HOMOLOG 18-RELATED 28 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03492 Aip-Chr5 141969648 141970055 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03492 3 133 Carbohydrate Esterase AT3G16970 31.884 1.21e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03492 - - adu:107489935 141.739