Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03490 ATGACGATCTCATCATTAGCACTCTCTAATGTTGTAATAATGCTCATACTTGTTTCTTTCAATCTCAATGTTAGAATGATTGATGCTCAAGTTGCTCCTCAACCTATTTTCATTGCTGTGACCATCCGCAACCAACTGATCCATTTGGATCTTCAAATTGATTGCAAGAATAATAGAAATAAAGATGAACTGAAGCAAACGGTTCCAGCTGATGGAAGTTGGACTTTCAAATTCCTTCCAATCCTTTTTCACGATATTTCGTACTCCTGTATCTTTTCTTGGAACGATGGGAAGAATCAAAGCCATAACTATCAAATTTATAATCAAGGCCGGGATGAGAAGTTGTGCCACCAAGAGTGTGATTGGGAAATCCACGAGACCGGTCCATGTAGGGTTTCGGGGAAACGTGCTCCTGAATGTCATCCTTGGGATCGTCCTATGTAA 444 0.4009 MTISSLALSNVVIMLILVSFNLNVRMIDAQVAPQPIFIAVTIRNQLIHLDLQIDCKNNRNKDELKQTVPADGSWTFKFLPILFHDISYSCIFSWNDGKNQSHNYQIYNQGRDEKLCHQECDWEIHETGPCRVSGKRAPECHPWDRPM 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03490 147 Pfam Plant self-incompatibility protein S1 40 143 IPR010264 -
Aip05g03490 147 PANTHER S-PROTEIN HOMOLOG 18-RELATED 19 143 - -
Aip05g03490 147 PANTHER - 19 143 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03490 Aip-Chr5 141928052 141928495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03490 39 144 Carbohydrate Esterase AT3G16970 31.250 2.32e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03490 - K13735 aip:107641383 314.694