Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03489 ATGCTCATACTTGTTTCTTTCAATCTCAATGTTAGTATGATTGATGCTCAAGTTGCTCCTCAACCTATTGCGGTTGAGGTGACCATAAACAACAAACTGATCGATTCGGATCTTAAATTTCACTGCAAGGATCAACACAGTGCCCAGGATGATTTAGGGGACCAAACGGTTTCAACTGGTCGAAGTTTTAGTTTCAAATTCCTTGCAAGCCCTTTTTACGTGCCTTTGTACTCCTGTACCTTTTCTTGGCATGGGGCGCCAGATCGTCACTTTGATATTTATGAGGGTGAACGTGATGGTAAAAAATGCAACCAAGATTGTACTTGGGACATCTACGAGATCAATCCATGTAGGGTTTCGGGTTTTGATCAACAATGTTTTCCTTGGAAAGAGGGGTGA 399 0.4185 MLILVSFNLNVSMIDAQVAPQPIAVEVTINNKLIDSDLKFHCKDQHSAQDDLGDQTVSTGRSFSFKFLASPFYVPLYSCTFSWHGAPDRHFDIYEGERDGKKCNQDCTWDIYEINPCRVSGFDQQCFPWKEG 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03489 132 PANTHER S-PROTEIN HOMOLOG 18-RELATED 9 129 - -
Aip05g03489 132 PANTHER - 9 129 IPR010264 -
Aip05g03489 132 Pfam Plant self-incompatibility protein S1 27 129 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03489 Aip-Chr5 141902379 141902777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03489 21 129 Carbohydrate Esterase AT3G16970 32.174 3.53e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03489 - K08747 aip:107641383 127.487